CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10003501m
FamilyGT2
Protein PropertiesLength: 246 Molecular Weight: 27743.2 Isoelectric Point: 9.2125
ChromosomeChromosome/Scaffold: 5 Start: 42649977 End: 42652003
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2141832.50006e-41
  SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGMNCLHSWFEHASGSFVVIMDADLSHHPKYL
  PSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDV
Full Sequence
Protein Sequence     Length: 246     Download
NNMEETNKNK NKYSIIIPTY NERLNIALIV YLIFKHLRDV DFEIIVVDDG SPDGTQEVVK    60
QLQQLYGEDR ILLRPRPKKL GLGMNCLHSW FEHASGSFVV IMDADLSHHP KYLPSFIKKQ    120
LETGASIVTG TRYVRSGGVH GWNLMRKLTS RGANVLAQTL LWPGVSDLTG SFRLYKKSVL    180
EDVISSCVSK GYVFQMEMIV RACRKGYHIE EVPITFVDRV FGSSKLGGSE IVEYLKGLLY    240
LLITT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00535Glycos_transf_22.0e-3114183173+
cd04188DPG_synthase5.0e-3715225222+
cd04179DPM_DPG-synthase_like8.0e-6615202189+
cd06442DPM1_like4.0e-12515241227+
PLN02726PLN027263.0e-16713245234+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankAAM63196.1032451242unknown [Arabidopsis thaliana]
RefSeqNP_564118.1012453246dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putative [Arabidopsis thaliana]
RefSeqXP_002285933.1032451243PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002300644.1072453240predicted protein [Populus trichocarpa]
RefSeqXP_002510671.1092453238dolichol-phosphate mannosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2z87_B0.00000031411895196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z87_A0.00000031411895196A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp- Galnac And Udp
PDB2z86_D0.00000031411896197A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z86_C0.00000031411896197A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
PDB2z86_B0.00000031411896197A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FC91924024812460
DY30657124812460
DN95848923212320
DV45551424312430
DW499473233132450
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00839.1Aquca_007_00839.2
Arabidopsis lyrata889509
Arabidopsis thalianaAT1G20575.1
Brachypodium distachyonBradi2g19800.1
Brassica rapaBra025828Bra012235
Capsella rubellaCarubv10010457mCarubv10010118m
Chlamydomonas reinhardtiiCre03.g150950.t1.1
Citrus sinensisorange1.1g026146m
Cucumis sativusCucsa.272070.1Cucsa.272070.2Cucsa.272070.3Cucsa.272070.4
Eucalyptus grandisEucgr.F01769.1
Fragaria vescamrna01849.1-v1.0-hybrid
Glycine maxGlyma13g24040.2Glyma07g32560.4Glyma07g32560.3Glyma07g32560.1Glyma13g24040.1
Gossypium raimondiiGorai.005G113700.2Gorai.005G113700.1Gorai.005G113700.3Gorai.005G113700.4Gorai.002G116900.2
Gorai.002G116900.1
Linum usitatissimumLus10013228Lus10030748
Malus domesticaMDP0000284475
Manihot esculentacassava4.1_014960mcassava4.1_014955m
Medicago truncatulaMedtr2g097220.1
Mimulus guttatusmgv1a012434m
Oryza sativaLOC_Os03g60939.1
Panicum virgatumPavirv00006084mPavirv00010357mPavirv00010356mPavirv00041144mPavirv00011250m
Pavirv00010359m
Physcomitrella patensPp1s182_58V6.1
Phaseolus vulgarisPhvul.003G057700.1
Picea abiesMA_10426906g0010MA_158782g0100.50.214MA_159042g1170
Populus trichocarpaPotri.005G250900.1Potri.002G010300.1Potri.005G250900.2
Prunus persicappa010139m
Ricinus communis30170.m014358
Setaria italicaSi039247mSi037228m
Selaginella moellendorffii98270
Sorghum bicolorSb01g002910.1
Thellungiella halophilaThhalv10008599m
Vitis viniferaGSVIVT01008672001
Volvox carteriVocar20000557m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny