| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003795m |
| Family | AA1 |
| Protein Properties | Length: 554 Molecular Weight: 61467.9 Isoelectric Point: 4.4238 |
| Chromosome | Chromosome/Scaffold: 5 Start: 39267821 End: 39271450 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 11 | 539 | 0 |
| DYLFVVKEASYTRLCSTKDILTVNGQFPGPTIRVFTGDTIFVEVSNEGKENITIHWHGVRQPRYPWSDGPAYITQCPIKPGASFRQKIIFSEEEGTLWWH AHSDWSRATVHGAIIIQPRPETAGYPFPEPNAEVPIILGEWWKQDVTEVRNELLRTGGLPAASDAFTINGQPGDLYPCSSSETFTLTVDEGKTYLLRIIN AAMDEMLFFSIANHDLTVVGTDGAYTNPLTTSYITISPGQTLDVLFQANQNPNLYYMASSVYSTAVNLDFINNTTATAVLQYNGNYTPISSPPLPYLPSR NDTNSAFQFIGSLRSLANEDHPIDVPLDITSSIFSTVSLNTLPCENDNNSCEGPNGTRLAASLNNQSFVEPSPIAILEAYYERINGVYGENFPDFPPYLF NFTADDLPTILQIPEQGTEVKVLDYDSAVEINFQGTNLVAGTSHPIHLHGYSFFVVGFGFGNFDEEKDPLNYNLIDPPLRTIVDVPISGWATVRFRASNP GVWFMHCHREEHLTWGMKTVFIVKNGESP | |||
| Full Sequence |
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| Protein Sequence Length: 554 Download |
| LLFSLRSASN DYLFVVKEAS YTRLCSTKDI LTVNGQFPGP TIRVFTGDTI FVEVSNEGKE 60 NITIHWHGVR QPRYPWSDGP AYITQCPIKP GASFRQKIIF SEEEGTLWWH AHSDWSRATV 120 HGAIIIQPRP ETAGYPFPEP NAEVPIILGE WWKQDVTEVR NELLRTGGLP AASDAFTING 180 QPGDLYPCSS SETFTLTVDE GKTYLLRIIN AAMDEMLFFS IANHDLTVVG TDGAYTNPLT 240 TSYITISPGQ TLDVLFQANQ NPNLYYMASS VYSTAVNLDF INNTTATAVL QYNGNYTPIS 300 SPPLPYLPSR NDTNSAFQFI GSLRSLANED HPIDVPLDIT SSIFSTVSLN TLPCENDNNS 360 CEGPNGTRLA ASLNNQSFVE PSPIAILEAY YERINGVYGE NFPDFPPYLF NFTADDLPTI 420 LQIPEQGTEV KVLDYDSAVE INFQGTNLVA GTSHPIHLHG YSFFVVGFGF GNFDEEKDPL 480 NYNLIDPPLR TIVDVPISGW ATVRFRASNP GVWFMHCHRE EHLTWGMKTV FIVKNGESPQ 540 ERLLPPPPDV PPC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 1.0e-49 | 11 | 537 | 557 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02191 | PLN02191 | 6.0e-54 | 1 | 543 | 580 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 1.0e-68 | 25 | 539 | 554 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-75 | 25 | 543 | 555 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 12 | 553 | 542 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002264394.1 | 0 | 6 | 553 | 25 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264702.1 | 0 | 6 | 553 | 21 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002265713.1 | 0 | 6 | 553 | 25 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002267373.1 | 0 | 6 | 553 | 25 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002271411.1 | 0 | 6 | 553 | 25 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 7 | 543 | 1 | 536 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
| PDB | 1asq_A | 0 | 7 | 543 | 1 | 536 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
| PDB | 1asp_B | 0 | 7 | 543 | 1 | 536 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
| PDB | 1asp_A | 0 | 7 | 543 | 1 | 536 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
| PDB | 1aso_B | 0 | 7 | 543 | 1 | 536 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO797675 | 506 | 53 | 554 | 0 |
| CB974476 | 273 | 8 | 280 | 0 |
| CX074948 | 214 | 191 | 404 | 0 |
| CB974655 | 252 | 8 | 259 | 0 |
| JK514811 | 262 | 36 | 297 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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