| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003818m |
| Family | CE8 |
| Protein Properties | Length: 577 Molecular Weight: 63888.6 Isoelectric Point: 9.6637 |
| Chromosome | Chromosome/Scaffold: 5 Start: 24092625 End: 24094663 |
| Description | root hair specific 12 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 271 | 561 | 0 |
| AVVGKDRFAKYKTINDALRAVPDKSKKKFIIYVKKGVYVENVRIEKPKWNVVMIGDGMNETIVSGHRNFIDGTPTFSTATFAVFGQGFVARDMGFRNTAG PSKHQAVALMSTADHSVFHRCQFDAYQDTLYAHSNRQFYSECNIYGTVDFIFGNSAAVLQNCKILPRRPMPGQKNTITAQGKKDPNENTGIAIQNCTILP FGDLSGVETYLGRPWKNYSTTIIMQSMMGSFIHPSGWLPWVGNSAPNTIFYSEFENYGAGSSMKKRVKWKGLRGISYKEAGKFTVRAFLQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 577 Download |
| MSSFRSYGKV DEADLHARLE ARRRTRRRIA IVSLSSIVLV AVIVAAVVGI TRNTDSDRVE 60 AENNGRGRVI STAIKAVCDV TMYKDTCYDS LSKGASNSSQ IQPEELFKLA IKVASNELSK 120 ASDKFFSDHN GTSDDNNNNN NIMFLDALGN CRELLSMAWD SLDSSLSSGK SVSDAVNDLK 180 TMLSSAGTYQ ETCIDGLEEA KPGFRARVLE YLRNSTEMTS NALAILTGIS KVESSLKLRR 240 LLGEPPHEWL RPEDRKLLQS PAENWKKNAN AVVGKDRFAK YKTINDALRA VPDKSKKKFI 300 IYVKKGVYVE NVRIEKPKWN VVMIGDGMNE TIVSGHRNFI DGTPTFSTAT FAVFGQGFVA 360 RDMGFRNTAG PSKHQAVALM STADHSVFHR CQFDAYQDTL YAHSNRQFYS ECNIYGTVDF 420 IFGNSAAVLQ NCKILPRRPM PGQKNTITAQ GKKDPNENTG IAIQNCTILP FGDLSGVETY 480 LGRPWKNYST TIIMQSMMGS FIHPSGWLPW VGNSAPNTIF YSEFENYGAG SSMKKRVKWK 540 GLRGISYKEA GKFTVRAFLQ GDRWISDAGV AYKPGL* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02713 | PLN02713 | 2.0e-142 | 178 | 576 | 431 | + Probable pectinesterase/pectinesterase inhibitor |
| PLN02745 | PLN02745 | 8.0e-158 | 70 | 576 | 531 | + Putative pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 7.0e-174 | 270 | 562 | 298 | + Pectinesterase. |
| PLN02468 | PLN02468 | 0 | 4 | 576 | 580 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 0 | 3 | 572 | 591 | + pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29155.1 | 0 | 1 | 576 | 1 | 561 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273396.1 | 0 | 1 | 576 | 4 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311918.1 | 0 | 1 | 576 | 1 | 568 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316458.1 | 0 | 1 | 576 | 1 | 569 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515781.1 | 0 | 1 | 576 | 1 | 573 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 269 | 576 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 270 | 576 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-21 | 270 | 535 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-21 | 270 | 535 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-21 | 270 | 535 | 5 | 315 | A Chain A, Pectin Methylesterase From Carrot |
