| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003884m |
| Family | GH9 |
| Protein Properties | Length: 478 Molecular Weight: 52999.2 Isoelectric Point: 8.9525 |
| Chromosome | Chromosome/Scaffold: 5 Start: 108929 End: 112283 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 2 | 449 | 0 |
| DSCLTDGKFDSSGITNDLLGGYYDAGDAIKFHFPASFNVTMLSWSVIEYRAKYEAAGELNHVKEIIKWGTDYLLKTFNHSADSISRIIAQVGVGDISGGN KIPNDLYCWIRPEGIDYDRPVQECTSSSDLAAEMAAASIVFKDNEEYSKKLIHSAIMIFKFSRQYRGRYSAGGVEAGWFYNSRSYWDEFTWSGAWLYYAT GNSSYLKLVTTTGLGKQAGIFRGILDNSLLSWDNMPAGTALLLSRLRLLLNLGYPYDEMLRAFHNQTAITMCSYLPNFSSWNATKAKLSFAFYRGLIQLN HGRPQPLQYVTNAAFLASLFSNCLEAAGLLGWFCGPNLITTDVMRRFAKTQIDYILGNNPQKMSYLVGFGSPYPQYVHHRGASIPKNKIKYSCKGGWKWR HSSKPNPNTLVGAMVAGPHKHDGFHDVRSNYNYTVPTLHDNAGLVAAL | |||
| Full Sequence |
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| Protein Sequence Length: 478 Download |
| GDSCLTDGKF DSSGITNDLL GGYYDAGDAI KFHFPASFNV TMLSWSVIEY RAKYEAAGEL 60 NHVKEIIKWG TDYLLKTFNH SADSISRIIA QVGVGDISGG NKIPNDLYCW IRPEGIDYDR 120 PVQECTSSSD LAAEMAAASI VFKDNEEYSK KLIHSAIMIF KFSRQYRGRY SAGGVEAGWF 180 YNSRSYWDEF TWSGAWLYYA TGNSSYLKLV TTTGLGKQAG IFRGILDNSL LSWDNMPAGT 240 ALLLSRLRLL LNLGYPYDEM LRAFHNQTAI TMCSYLPNFS SWNATKAKLS FAFYRGLIQL 300 NHGRPQPLQY VTNAAFLASL FSNCLEAAGL LGWFCGPNLI TTDVMRRFAK TQIDYILGNN 360 PQKMSYLVGF GSPYPQYVHH RGASIPKNKI KYSCKGGWKW RHSSKPNPNT LVGAMVAGPH 420 KHDGFHDVRS NYNYTVPTLH DNAGLVAALV ALSGKKSTGG IDKSTIFTEV PLMFPAP* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02171 | PLN02171 | 2.0e-88 | 1 | 443 | 458 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-89 | 1 | 443 | 458 | + endoglucanase | ||
| PLN02613 | PLN02613 | 5.0e-95 | 1 | 443 | 456 | + endoglucanase | ||
| PLN02345 | PLN02345 | 5.0e-113 | 1 | 444 | 454 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-122 | 1 | 444 | 454 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAQ08018.1 | 0 | 1 | 470 | 139 | 603 | endo-1,4-beta-glucanase [Gossypium hirsutum] |
| GenBank | AAS45400.1 | 0 | 1 | 470 | 139 | 603 | endo-1,4-beta-glucanase [Populus tremuloides] |
| GenBank | AAT75041.1 | 0 | 1 | 470 | 139 | 603 | Cel9A [Populus tremula x Populus tremuloides] |
| EMBL | CBI29606.1 | 0 | 1 | 470 | 21 | 485 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002269783.1 | 0 | 1 | 470 | 138 | 602 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 11 | 452 | 40 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ksc_A | 0 | 11 | 452 | 40 | 428 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 1ks8_A | 0 | 11 | 452 | 40 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 7.00649e-43 | 1 | 452 | 56 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 3e-40 | 1 | 452 | 35 | 440 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794674 | 475 | 1 | 470 | 0 |
| HO796213 | 476 | 1 | 470 | 0 |
| BF010444 | 476 | 1 | 470 | 0 |
| HO778339 | 363 | 1 | 358 | 0 |
| HO778339 | 111 | 360 | 470 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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