| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004034m |
| Family | GH35 |
| Protein Properties | Length: 822 Molecular Weight: 91715.6 Isoelectric Point: 8.4702 |
| Chromosome | Chromosome/Scaffold: 5 Start: 37609414 End: 37614258 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 36 | 341 | 0 |
| LIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFIKEVQAQGLYVCLRIGPFIEGEWGYGGLPFWLH DVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENEYGMVEHSFLEKGPPYVRWAAKLAVDLQTGVPWVMCKQDDAPDPVINACNG RQCGETFAGPNSPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASAYVLTGYYDQAPLDEYGLLRQPKWGH LKELHS | |||
| Full Sequence |
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| Protein Sequence Length: 822 Download |
| MGQYQLLCLF GLLLTTIGGS DGGGGGNNVT YDGRSLIING HRKILFSGSI HYPRSTPQMW 60 PRLIAKAKEG GLDVVQTLVF WNLHEPQPGQ FDFSGRRDLV RFIKEVQAQG LYVCLRIGPF 120 IEGEWGYGGL PFWLHDVPGI VFRSDNEPFK FHMKRYATMI VNMMKAARLY ASQGGPIILS 180 QIENEYGMVE HSFLEKGPPY VRWAAKLAVD LQTGVPWVMC KQDDAPDPVI NACNGRQCGE 240 TFAGPNSPDK PAIWTENWTS FYQVYGDEAR IRSAEDIAYH VALFIAKMKG SYVNYYMYHG 300 GTNFGRTASA YVLTGYYDQA PLDEYGLLRQ PKWGHLKELH SAVKLCLKPM LSGVLVSMNF 360 STLQEAFIFQ GSSECAAFLV NKDKRNNATV YFSNLMYELP PLSISILPDC KTVAFNTAKV 420 STQYGTRSME QRQKLDSVEQ WEEYKEAIPT YDETSLRANF LLEQMNTTKD ASDYLWYNFR 480 FKHDPSDSES VLKVSSLGHV LHAFINGEFV GSAHGKHSDK SFTLEKMVHL INGTNNVSLL 540 SVMVGLPDSG AYLERRVAGL RNVSIQGAKE LKDFSSFSWG YQVGLLGEKL QIFTDYGSRI 600 VPWSRYGSST HQPLTWYKTV FDAPTGSDPV AINLIPMGKG EAWVNGQSIG RYWVSFLTPQ 660 GTPSQSWYHI PRSFLKPTGN LLVLLEEENG YPPGISIDTV SVTKICGHVS DSHLPPVISW 720 RSQNQRTLKT HKKIPGRRPK VQIRCPSGRK ISTILFASYG NPNGNCDNYA IGSCHSSNSR 780 AVVEKACLGK RSCTVPVWTE KFYGDPCPGI PKALLVDAQC T* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-8 | 51 | 187 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 4.0e-23 | 29 | 319 | 343 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-24 | 743 | 820 | 81 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 5.0e-149 | 35 | 343 | 323 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 28 | 821 | 825 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18990.1 | 0 | 10 | 821 | 13 | 817 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI18991.1 | 0 | 30 | 820 | 33 | 820 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 30 | 820 | 25 | 812 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 25 | 821 | 4 | 798 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 28 | 821 | 1 | 764 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8e-37 | 35 | 339 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.005 | 468 | 686 | 374 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-30 | 29 | 330 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-30 | 29 | 330 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 2e-30 | 29 | 330 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
