Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004268m |
Family | GH35 |
Protein Properties | Length: 903 Molecular Weight: 101041 Isoelectric Point: 6.8319 |
Chromosome | Chromosome/Scaffold: 9 Start: 15624983 End: 15638532 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 53 | 355 | 0 |
IIDGNRRMLISAGIHYPRATPEMWPDLIAKSKEGGADVIETYVFWNAHESIRGQYNFKGKNDIVKFVKLVGSSGLYLQLRIGPYVCAEWNFGGFPVWLRD IPGIEFRTNNAPFKEEMQRFVKKIVDLMREEMLFSWQGGPIIMLQIENEYGNMESSYGQQGKDYVKWAASMALGLGAGVPWVMCKQTDAPENIIDACNGY YCDGYKPNSYNKPTLWTENWDGWYTTWGGRLPHRPVEDLAFAVARFFQRGGSFMNYYMYFGGTNFGRTSGGPFYITSYDYDAPIDEYGLLSEPKWGHLKD LHA |
Full Sequence |
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Protein Sequence Length: 903 Download |
MHSKKNNRAL LQCLALSVYP MMMMMIHLSC VSSSSASTFF KPFNVSYDHR AIIIDGNRRM 60 LISAGIHYPR ATPEMWPDLI AKSKEGGADV IETYVFWNAH ESIRGQYNFK GKNDIVKFVK 120 LVGSSGLYLQ LRIGPYVCAE WNFGGFPVWL RDIPGIEFRT NNAPFKEEMQ RFVKKIVDLM 180 REEMLFSWQG GPIIMLQIEN EYGNMESSYG QQGKDYVKWA ASMALGLGAG VPWVMCKQTD 240 APENIIDACN GYYCDGYKPN SYNKPTLWTE NWDGWYTTWG GRLPHRPVED LAFAVARFFQ 300 RGGSFMNYYM YFGGTNFGRT SGGPFYITSY DYDAPIDEYG LLSEPKWGHL KDLHAAIKLC 360 EPALVAADSA QYIKLGQNQE AHVYRANVLS EGPNSNRYGS QSNCSAFLAN IDEHKAASVT 420 FLGQSYTLPP WSVSILPDCR NTVFNTAKVS SQTSIKTVEF SLPLSPNISV PQQSMIESKL 480 SSTSKSWMTV KEPIGVWSEN NFTVQGILEH LNVTKDYSDY LWHITKIYVS DDDISFWKTN 540 EVRPTVTIDS MRDVLRVFIN GQLTGSVIGH WVKVVQPVEF QSGYNDLILL SQTVGLQNYG 600 AFLEKDGAGF RGQVKLTGFK NGDIDLSKIL WTYQVGLKGE FQQIYGIEEN EAEWTDLTRD 660 GIPSTFTWYK TYFDAPDGID PVALDLGSMG KGQAWVNGHH IGRYWTVVAP KGGCQDTCDY 720 RGAYNSDKCT TNCGNPTQTW YHVPRSWLQA SNNLLVIFEE TGGNPFEISV KLRSTRIVCE 780 QVSESHYPPV RKWSNSYSVD GKLSINKMAP EMHLHCQDGY IISSIEFASY GTPQGRCQKF 840 SRGNCHAPMS LSVVSEACQG KSSCSIGITN AVFGGDPCRG IVKTLAVEAR CIPSSSTGFS 900 QI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.001 | 67 | 207 | 156 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 8.0e-21 | 45 | 206 | 172 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-26 | 814 | 891 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 5.0e-156 | 51 | 357 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 44 | 891 | 854 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 8 | 898 | 12 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 8 | 902 | 12 | 894 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002263385.1 | 0 | 18 | 902 | 1 | 882 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002328900.1 | 0 | 24 | 901 | 19 | 890 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 36 | 901 | 31 | 896 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9.94922e-44 | 51 | 353 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.001 | 545 | 762 | 399 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-38 | 43 | 344 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-38 | 43 | 344 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |