Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004369m |
Family | GH3 |
Protein Properties | Length: 778 Molecular Weight: 84403.6 Isoelectric Point: 8.8555 |
Chromosome | Chromosome/Scaffold: 9 Start: 1059388 End: 1065318 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 321 | 0 |
AAVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAAAFNESLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLAGKYAASYVRGLQGNTGSRLKVAACCKHYTAYDLDNWNGVDRYHFNARVSKQDLEDTYNVPFKACVVEGKVASVMCSYNQVNGKPTCADPDILKN TIRGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 778 Download |
MPRHFLFLTF FLIFSCFGSR FVESRVPFAC DPRNGLTRSL RFCRTSVPIH VRVQDLIGRL 60 TLQEKIRLLV NNAAAVPRLG IQGYEWWSEA LHGVSNVGPG TKFGGAFPGA TSFPQVITTA 120 AAFNESLWEE IGRVVSDEAR AMYNGGMAGL TYWSPNVNIF RDPRWGRGQE TPGEDPVLAG 180 KYAASYVRGL QGNTGSRLKV AACCKHYTAY DLDNWNGVDR YHFNARVSKQ DLEDTYNVPF 240 KACVVEGKVA SVMCSYNQVN GKPTCADPDI LKNTIRGQWR LDGYIVSDCD SVGVLYNTQH 300 YTRTPEEAAA DAIKAGLDLD CGPFLAIHTE RAVRGGLLRE EDVNLALAYT ITVQMRLGMF 360 DGEPSAQPFG NLGPRDVCTP AHQQLALQAA HQGIVLLKNS ARTLPLSTLR HHTVAVIGPN 420 SDVTVTMIGN YAGVACGYTT PLQGISRYAK TIHQAGCLGV ACNGNQLIGA AEVAARQADA 480 TVLVMGLDQS IEAEFIDRAG LLLPGRQQEL VSRVAKASRG PVVLVLMCGG PVDVSFAKND 540 PRIGAILWVG YPGQAGGAAI ADVLFGRANP GGKLPMTWYP QDYVARLPMT DMRMRAGRGY 600 PGRTYRFYKG PVVFPFGHGM SYTTFAHTLS KAPNQFSVPI ATSLYAFKNT TISSNAIRVA 660 HTNCNDAMSL GLHVDVKNTG DMAGTHTLLV FAKPPAGNWS PNKQLIGFKK VHVTAGALQS 720 VRLDIHVCKH LSVVDKFGIR RIPMGEHSLH IGDLKHSISL QANLEGINFN NDVPSLP* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 8.0e-52 | 71 | 457 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-62 | 394 | 624 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 3.0e-62 | 56 | 344 | 296 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-76 | 111 | 725 | 683 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 5 | 762 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 7 | 767 | 11 | 770 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 1 | 755 | 1 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002311398.1 | 0 | 22 | 764 | 14 | 755 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002316021.1 | 0 | 19 | 767 | 19 | 766 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 21 | 765 | 35 | 778 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 111 | 725 | 91 | 696 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 3u48_A | 0 | 111 | 725 | 91 | 696 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 3u4a_B | 0 | 111 | 725 | 91 | 696 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 3u4a_A | 0 | 111 | 725 | 91 | 696 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 2x41_A | 4.06377e-44 | 52 | 764 | 3 | 711 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |