| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004403m |
| Family | AA3 |
| Protein Properties | Length: 745 Molecular Weight: 81483.3 Isoelectric Point: 6.7665 |
| Chromosome | Chromosome/Scaffold: 9 Start: 6266866 End: 6272016 |
| Description | fatty alcohol oxidase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 213 | 742 | 0 |
| VQSLTQKGLQVTKDSKQNVYKIKCDVVIVGSGCGGGVAAAVLASAGQKVVVIEKGNYFTPKDYSLLEGPSFEQLYESGGILPTTDASMTILAGSTVGGGS AVNWSACIKTPKSLLQEWAGDYKLPLFGSPDYLSAMDIVWERIGVTENCVQEGFQNQVLQKGCKNLGLDVERIPRNSSENHYCGSCGHGCKSGDKKGTDS TWLVDAVNHGAVILTGCKAERFILEKSDNGSTRTMKCSGVIAKALNNDIRMKFQIETKATISACGALLTPPLMISSGLKNQHIGKNLHLHPVLMAWGYFP DSNLEFKGKNYEGGIITSAHKVVSADSEVRALIETPEFSPAKFSVFCPWLSGIDFKQTMLKYSRTAHLITIIRDRGSGEVKVEGRISHKLDQLDKENLKA GLRQALRILIAAGAVEVGTHRSDGQQLKCEGITEKEVEQFLDTVYAAEGPKSPVENWMVYGTAHQMGSCRMGVNEKEGAVDENGQSWEAEGLYVCDASVF PSAVGVNPMITIQSTAYCLSKRIAESLREQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 745 Download |
| MGRNCHPLLS GRRSKAEKHN HGLSSAELLS LASLCEVFLP TLSSVSSEGK EDRPSQALES 60 FYKASGAQAP VPDKVAEIVV KRLLTEAVIL IRVVLLMLST KLGTLMLCGS LCLSEKWPYI 120 NNFSSMSLEK REKVLQKWFK NWIFTPVRIA FFILKTFCLF VFFCQLDENG KNPAWEAIDY 180 HVENDEDVSE VQQERPLEKG IVETMYETDS TIVQSLTQKG LQVTKDSKQN VYKIKCDVVI 240 VGSGCGGGVA AAVLASAGQK VVVIEKGNYF TPKDYSLLEG PSFEQLYESG GILPTTDASM 300 TILAGSTVGG GSAVNWSACI KTPKSLLQEW AGDYKLPLFG SPDYLSAMDI VWERIGVTEN 360 CVQEGFQNQV LQKGCKNLGL DVERIPRNSS ENHYCGSCGH GCKSGDKKGT DSTWLVDAVN 420 HGAVILTGCK AERFILEKSD NGSTRTMKCS GVIAKALNND IRMKFQIETK ATISACGALL 480 TPPLMISSGL KNQHIGKNLH LHPVLMAWGY FPDSNLEFKG KNYEGGIITS AHKVVSADSE 540 VRALIETPEF SPAKFSVFCP WLSGIDFKQT MLKYSRTAHL ITIIRDRGSG EVKVEGRISH 600 KLDQLDKENL KAGLRQALRI LIAAGAVEVG THRSDGQQLK CEGITEKEVE QFLDTVYAAE 660 GPKSPVENWM VYGTAHQMGS CRMGVNEKEG AVDENGQSWE AEGLYVCDAS VFPSAVGVNP 720 MITIQSTAYC LSKRIAESLR EQSS* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 7.0e-5 | 674 | 719 | 47 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 4.0e-5 | 589 | 740 | 156 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| COG2303 | BetA | 3.0e-21 | 260 | 741 | 548 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 1.0e-23 | 597 | 731 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| pfam00732 | GMC_oxred_N | 1.0e-87 | 283 | 504 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71289.1 | 0 | 1 | 743 | 1 | 739 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285334.1 | 0 | 1 | 743 | 1 | 739 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311685.1 | 0 | 1 | 741 | 1 | 743 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002314488.1 | 0 | 30 | 739 | 3 | 713 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528823.1 | 0 | 1 | 742 | 1 | 745 | disulfide oxidoreductase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3t37_A | 0.000004 | 220 | 714 | 4 | 499 | A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium Loti |
| PDB | 2jbv_B | 0.0002 | 424 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 2jbv_A | 0.0002 | 424 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into The Catalytic Mechanism |
| PDB | 3nne_H | 0.0003 | 424 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0003 | 424 | 740 | 225 | 527 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794753 | 740 | 1 | 739 | 0 |
| HO779224 | 455 | 207 | 661 | 0 |
| EY679951 | 303 | 306 | 597 | 0 |
| ES815664 | 349 | 336 | 684 | 0 |
| HO811216 | 324 | 418 | 739 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
