| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004420m |
| Family | GH35 |
| Protein Properties | Length: 735 Molecular Weight: 81917.3 Isoelectric Point: 6.1279 |
| Chromosome | Chromosome/Scaffold: 9 Start: 15626737 End: 15638532 |
| Description | beta galactosidase 9 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 1 | 187 | 0 |
| MQRFVKKIVDLMREEMLFSWQGGPIIMLQIENEYGNMESSYGQQGKDYVKWAASMALGLGAGVPWVMCKQTDAPENIIDACNGYYCDGYKPNSYNKPTLW TENWDGWYTTWGGRLPHRPVEDLAFAVARFFQRGGSFMNYYMYFGGTNFGRTSGGPFYITSYDYDAPIDEYGLLSEPKWGHLKDLHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 735 Download |
| MQRFVKKIVD LMREEMLFSW QGGPIIMLQI ENEYGNMESS YGQQGKDYVK WAASMALGLG 60 AGVPWVMCKQ TDAPENIIDA CNGYYCDGYK PNSYNKPTLW TENWDGWYTT WGGRLPHRPV 120 EDLAFAVARF FQRGGSFMNY YMYFGGTNFG RTSGGPFYIT SYDYDAPIDE YGLLSEPKWG 180 HLKDLHAAIK LCEPALVAAD SAQYIKLGQN QEAHVYRANV LSEGPNSNRY GSQSNCSAFL 240 ANIDEHKAAS VTFLGQSYTL PPWSVSILPD CRNTVFNTAK VSSQTSIKTV EFSLPLSPNI 300 SVPQQSMIES KLSSTSKSWM TVKEPIGVWS ENNFTVQGIL EHLNVTKDYS DYLWHITKIY 360 VSDDDISFWK TNEVRPTVTI DSMRDVLRVF INGQLTGSVI GHWVKVVQPV EFQSGYNDLI 420 LLSQTVGLQN YGAFLEKDGA GFRGQVKLTG FKNGDIDLSK ILWTYQVGLK GEFQQIYGIE 480 ENEAEWTDLT RDGIPSTFTW YKTYFDAPDG IDPVALDLGS MGKGQAWVNG HHIGRYWTVV 540 APKGGCQDTC DYRGAYNSDK CTTNCGNPTQ TWYHVPRSWL QASNNLLVIF EETGGNPFEI 600 SVKLRSTRIV CEQVSESHYP PVRKWSNSYS VDGKLSINKM APEMHLHCQD GYIISSIEFA 660 SYGTPQGRCQ KFSRGNCHAP MSLSVVSEAC QGKSSCSIGI TNAVFGGDPC RGIVKTLAVE 720 ARCIPSSSTG FSQI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02140 | Gal_Lectin | 5.0e-26 | 646 | 723 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-81 | 1 | 189 | 204 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 1 | 723 | 729 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAD91079.1 | 0 | 1 | 730 | 160 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
| DDBJ | BAE72075.1 | 0 | 1 | 734 | 160 | 894 | pear beta-galactosidase3 [Pyrus communis] |
| RefSeq | XP_002263385.1 | 0 | 1 | 734 | 153 | 882 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
| RefSeq | XP_002328900.1 | 0 | 1 | 733 | 160 | 890 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518051.1 | 0 | 1 | 733 | 164 | 896 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.00000000000002 | 21 | 185 | 150 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.001 | 377 | 594 | 399 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.0000000009 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.0002 | 369 | 607 | 394 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.0000000009 | 22 | 172 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DY278551 | 292 | 252 | 543 | 0 |
| CX642150 | 277 | 276 | 552 | 0 |
| EY764715 | 275 | 346 | 620 | 0 |
| FC899750 | 271 | 252 | 522 | 0 |
| DY278551 | 56 | 540 | 592 | 0.0000005 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |