| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004553m |
| Family | GH47 |
| Protein Properties | Length: 625 Molecular Weight: 69344.3 Isoelectric Point: 4.8203 |
| Chromosome | Chromosome/Scaffold: 9 Start: 4510269 End: 4520385 |
| Description | Glycosyl hydrolase family 47 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH47 | 47 | 472 | 0 |
| MFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMK IPSYDNQLLNLAEDLARRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVF TGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWLLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSV WKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFD LAVGPDNLVENGPYKYIFSTEGHLLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 625 Download |
| MGTSKQSFGL LFLVSILLSG NFFICRSLAD GVTAEEARQL RDEVREMFYH AFDGYMEHAF 60 PLDELRPLSC EGEDSLGGYA LTLVDSLDTL ALLGDRERFT TSVEWIGKNL QFDINKTVSV 120 FETTIRVLGG LLSAHLIASD YATGMKIPSY DNQLLNLAED LARRLLPAFD TPTGIPFGSV 180 NLLHGVDEHE SKITSTAGGG TLTLEFGVLS RLTNDPIFEQ VTKKAVLGIW ARRSKLNLVG 240 AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYLLFGDEEY LYIFQESYQA AMHYLFNDPW 300 YVEVNMDSAA IVWLLFNSLQ AFWPGLQVLA GDIDPAVRTH AAFFSVWKRY GFTPEGFNLA 360 TLTIQQGQKS YPLRPELIES TYLLYKATRD PRYLDAGRDM VASLQYGTRC PCGYCHISDV 420 EFHKKEDHME SFFLAETVKY LWLLFDLAVG PDNLVENGPY KYIFSTEGHL LPATPQISLK 480 REHCSYFGAY CKDGDSKQGS ETSGVSADPQ ETNGSKFYGS WVHTGFPSDS FLESTSVPGL 540 IKGLCPGLTH GQKYGITYLP LVDTAPEDVS PTQKEPSQPT VVQSHSVVVV SDQGAHLIQS 600 KPNSDHKNAQ EVSPGRPESD PPKI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PTZ00470 | PTZ00470 | 4.0e-79 | 41 | 476 | 478 | + glycoside hydrolase family 47 protein; Provisional |
| pfam01532 | Glyco_hydro_47 | 3.0e-172 | 47 | 472 | 461 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
| GO:0005509 | calcium ion binding |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI26354.1 | 0 | 30 | 578 | 28 | 610 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199184.1 | 0 | 10 | 614 | 8 | 592 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
| RefSeq | XP_002280131.1 | 0 | 30 | 623 | 28 | 643 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311656.1 | 0 | 29 | 595 | 1 | 564 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517026.1 | 0 | 3 | 618 | 4 | 615 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nxc_A | 0 | 38 | 472 | 18 | 464 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayr_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayq_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayp_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
| PDB | 4ayo_A | 0 | 28 | 445 | 1 | 413 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
