Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10004628m |
Family | GT31 |
Protein Properties | Length: 578 Molecular Weight: 64660 Isoelectric Point: 8.6532 |
Chromosome | Chromosome/Scaffold: 9 Start: 460115 End: 463975 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT31 | 418 | 544 | 4.60004e-41 |
ERRMALRRSWMQYPAVRSGDVAVLFFIGLHKNRQVNFELWKEAQAYGDIQIMPFVDYYSLISLKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLSNLK EKPSNGLLFGLISYDSSPQRDKDSKWN |
Full Sequence |
---|
Protein Sequence Length: 578 Download |
MKSLKFAFPL FKMRNWSGGL LIMALAIILV MSYSFMGTQT QTQHRTQTQK QKHKQSANDF 60 FRNHPSNDSD MKGSQGVKEV KKTQKLFEKP HIINVQGLGD LYSLKNMLGE DSRPLLVWGH 120 MRLLLSRSDA LPETAQGVKE AAIAWKDLLS VIEEEKASKF SRRKNCPPFV SNLSKSLSSG 180 RLIIEVPCGL VEDSSITLVG IPDGRYGSFQ IELIGSQLSG ESNPPIILHY NVSLPGDNMT 240 EEPFIIQNSW TNELGWGKEE RCPAHGSSNT LKVDELVLCN EQVLRRSVEE NQNTSHPTPS 300 SDILANASRV GAHETSNFPF VDGNPFTTTI WVGLDGFHMT VNGRHETSLA YREKLEPWSV 360 TGVKVAGGVD LFSAFAEGLP VSEDFDFIVD VEHLKAPLIS RKRLVMLIGV FSTGNNFERR 420 MALRRSWMQY PAVRSGDVAV LFFIGLHKNR QVNFELWKEA QAYGDIQIMP FVDYYSLISL 480 KTIAICIFGT KILPAKYIMK TDDDAFVRID EVLSNLKEKP SNGLLFGLIS YDSSPQRDKD 540 SKWNGRIPHT HHGPMVQVIS SPGTLRNSLS KATRKEI* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
smart00908 | Gal-bind_lectin | 4.0e-17 | 187 | 373 | 187 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. |
cd00070 | GLECT | 4.0e-19 | 186 | 373 | 188 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. |
pfam01762 | Galactosyl_T | 6.0e-20 | 418 | 543 | 132 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. |
pfam00337 | Gal-bind_lectin | 4.0e-20 | 186 | 373 | 188 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). |
PLN03133 | PLN03133 | 0 | 13 | 543 | 550 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN60055.1 | 0 | 53 | 554 | 29 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001078115.1 | 0 | 4 | 543 | 10 | 510 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_002274418.1 | 0 | 53 | 544 | 29 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316064.1 | 0 | 36 | 554 | 1 | 516 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519288.1 | 0 | 1 | 554 | 12 | 566 | conserved hypothetical protein [Ricinus communis] |