| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004832m |
| Family | GH29 |
| Protein Properties | Length: 493 Molecular Weight: 55390.7 Isoelectric Point: 6.6547 |
| Chromosome | Chromosome/Scaffold: 9 Start: 28081760 End: 28084212 |
| Description | alpha-L-fucosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH29 | 39 | 341 | 0 |
| PSFSQLKWQQRELIMFLHFGVNTFTDSEWGTGNENPEIFNPLGLDANQWVNTAAEAGVSLMILTAKHHDGFCLWPSKFTEHSVTHSPWKHGRGDVVQELV NAAKARGVDVGLYLSPWDRHDPRYGHDLQYNEYYLAQLQELLTRYGDVREIWFDGAKGSNAPNMSYYFTDWFAMVKELQSSINIFSDAGPDVRWVGNEKG FAGSTCWSTINRTSLSIGNGSIVDYLSTGDAKGTDWLPAECDVSIRKGWFWHKSETPKKLSELLEIYYNSVGRNCVMLLNVPPNTTGLISETDVQRLREF GTA | |||
| Full Sequence |
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| Protein Sequence Length: 493 Download |
| MPKLCCFVCL ITILFQLTNL ASSKRQQVPT PPLPLSPLPS FSQLKWQQRE LIMFLHFGVN 60 TFTDSEWGTG NENPEIFNPL GLDANQWVNT AAEAGVSLMI LTAKHHDGFC LWPSKFTEHS 120 VTHSPWKHGR GDVVQELVNA AKARGVDVGL YLSPWDRHDP RYGHDLQYNE YYLAQLQELL 180 TRYGDVREIW FDGAKGSNAP NMSYYFTDWF AMVKELQSSI NIFSDAGPDV RWVGNEKGFA 240 GSTCWSTINR TSLSIGNGSI VDYLSTGDAK GTDWLPAECD VSIRKGWFWH KSETPKKLSE 300 LLEIYYNSVG RNCVMLLNVP PNTTGLISET DVQRLREFGT AIDTIFSKNL AENCFVKASS 360 QRAGKGGGFG PENVLDDDHL RTYWAPRDGD GISDDHWIEI RAADEGLRFN VIRIQEAIGL 420 GQRIKRHEIF VDGKLVAEGT TVGHKKLHRL ENGVIDGHVV RIKIKESRAV PLISSIGLHF 480 DPYWHPNRQS LT* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01120 | Alpha_L_fucos | 2.0e-34 | 46 | 339 | 328 | + Alpha-L-fucosidase. | ||
| smart00812 | Alpha_L_fucos | 7.0e-38 | 46 | 339 | 336 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
| COG3669 | COG3669 | 9.0e-62 | 43 | 478 | 456 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004560 | alpha-L-fucosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0007155 | cell adhesion |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002270630.1 | 0 | 42 | 486 | 22 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270674.1 | 0 | 26 | 491 | 3 | 466 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318264.1 | 0 | 1 | 487 | 1 | 483 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322431.1 | 0 | 1 | 487 | 1 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510887.1 | 0 | 1 | 486 | 1 | 483 | alpha-l-fucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3eyp_B | 0 | 34 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3eyp_A | 0 | 34 | 479 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
| PDB | 3mo4_B | 0 | 39 | 474 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3mo4_A | 0 | 39 | 474 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
| PDB | 3ues_B | 0 | 39 | 474 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
