Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10004877m |
Family | GH9 |
Protein Properties | Length: 477 Molecular Weight: 53005.9 Isoelectric Point: 7.1994 |
Chromosome | Chromosome/Scaffold: 9 Start: 27556176 End: 27559968 |
Description | glycosyl hydrolase 9B6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 11 | 466 | 0 |
NYADALTKSILFFEGQRSGKLPQDQRMTWRKDSALNDGADIGVDLTGGYYDAGDNVKFTFPMAFTATVLAWSVLEFGDSMGPDQHHALNAIRWATDFLMK ATNKPDTVYFQVGHGQEDHNCWQRPEDMDTPRAVFAATIEKPSSDVSAEIAAALAATSIVFKYSDQAYSATLLSRAKKVFEFGHKHRGRYSENYAKPPGA VCPFYCSGGIAEDDLAWGAMWLFKATNYDHYYWNSAVNSSKILNHNLHEFGWEGKNAGINVLVSTIVNKDGGTNKSDTDPFIQNADKFVCALMPESPTKV VYYTPGGLLKLQGVNFKHASLTFLLVVYSRFLKEANKEIHCGHVVVKRNRLIEIAKGYVDYMLGNNPMNMSYMVGYGKKFPHKIHHRGASLPSMDKHPAK IPCANNHFFHHSDLNELTGAIVGGPFDNDSYVDDRNTVERSEPTTYMNAPFVGLLA |
Full Sequence |
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Protein Sequence Length: 477 Download |
MAMLGTVASH NYADALTKSI LFFEGQRSGK LPQDQRMTWR KDSALNDGAD IGVDLTGGYY 60 DAGDNVKFTF PMAFTATVLA WSVLEFGDSM GPDQHHALNA IRWATDFLMK ATNKPDTVYF 120 QVGHGQEDHN CWQRPEDMDT PRAVFAATIE KPSSDVSAEI AAALAATSIV FKYSDQAYSA 180 TLLSRAKKVF EFGHKHRGRY SENYAKPPGA VCPFYCSGGI AEDDLAWGAM WLFKATNYDH 240 YYWNSAVNSS KILNHNLHEF GWEGKNAGIN VLVSTIVNKD GGTNKSDTDP FIQNADKFVC 300 ALMPESPTKV VYYTPGGLLK LQGVNFKHAS LTFLLVVYSR FLKEANKEIH CGHVVVKRNR 360 LIEIAKGYVD YMLGNNPMNM SYMVGYGKKF PHKIHHRGAS LPSMDKHPAK IPCANNHFFH 420 HSDLNELTGA IVGGPFDNDS YVDDRNTVER SEPTTYMNAP FVGLLAYFNR PPPAYI* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 9.0e-150 | 9 | 466 | 467 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-166 | 11 | 466 | 464 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 7.0e-172 | 8 | 472 | 473 | + cellulase | ||
PLN02308 | PLN02308 | 0 | 8 | 472 | 473 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 7 | 468 | 471 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24578.1 | 0 | 10 | 468 | 24 | 482 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002321833.1 | 0 | 1 | 473 | 1 | 485 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321834.1 | 0 | 1 | 468 | 13 | 486 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510937.1 | 0 | 6 | 475 | 23 | 503 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002510938.1 | 0 | 3 | 472 | 20 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 9 | 466 | 2 | 426 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
PDB | 1ksc_A | 0 | 9 | 466 | 2 | 426 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
PDB | 1ks8_A | 0 | 9 | 466 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 11 | 466 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 11 | 466 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX308494 | 200 | 244 | 443 | 0 |
HO788388 | 406 | 75 | 469 | 0 |
DY298091 | 343 | 11 | 347 | 0 |
FC917888 | 298 | 11 | 304 | 0 |
DY274281 | 345 | 3 | 344 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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