Basic Information | |
---|---|
Species | Citrus clementina |
Cazyme ID | Ciclev10004905m |
Family | GT47 |
Protein Properties | Length: 472 Molecular Weight: 54025.7 Isoelectric Point: 9.7314 |
Chromosome | Chromosome/Scaffold: 9 Start: 30520042 End: 30521726 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 69 | 398 | 0 |
QPFSVYIYDLPPEFNLGLVKNCHHLNVYTDMCPHVANHGLGQPLEHISAVSPGCWFATHQFIAEMIFHARLENHPLRTWDPSRATLFYVPFYGGLYASSN FRETNLTARDDLAVRFSEFLKSQPWWQRAKGKDHFVVLGRTAWDFMRTASGPDFGANTLLNLPRVQNVSVLTVERNPWRGSNQHGIPYPSYFHPSTSSQM LTWQQKMRLSKRPNLFTFIGAPRKGLEKAAIRDELIKQCGQSTRCKLLTCSNRSGASNKCYSPSEILGVMSKSQFCLQAPGDSFTRRSTFDSVLAGCIPV FFSQHTAYTQYAWYLPQDAEEYSVYINGEE |
Full Sequence |
---|
Protein Sequence Length: 472 Download |
MLSKKQSQLP IFVINNSSFK SSFFFIIFLT AWFFFLFYWL PPTNPKHISH HRTHNLIGNH 60 NINNHVRRQP FSVYIYDLPP EFNLGLVKNC HHLNVYTDMC PHVANHGLGQ PLEHISAVSP 120 GCWFATHQFI AEMIFHARLE NHPLRTWDPS RATLFYVPFY GGLYASSNFR ETNLTARDDL 180 AVRFSEFLKS QPWWQRAKGK DHFVVLGRTA WDFMRTASGP DFGANTLLNL PRVQNVSVLT 240 VERNPWRGSN QHGIPYPSYF HPSTSSQMLT WQQKMRLSKR PNLFTFIGAP RKGLEKAAIR 300 DELIKQCGQS TRCKLLTCSN RSGASNKCYS PSEILGVMSK SQFCLQAPGD SFTRRSTFDS 360 VLAGCIPVFF SQHTAYTQYA WYLPQDAEEY SVYINGEEGN NARRKRIEDE LMKIPTKRVE 420 KMRNKVIDLI PRVTYKHPNA SDDGEFEDAV DVALAAIANH VRSILGRGLV L* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 6.0e-64 | 70 | 394 | 339 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC42883.1 | 0 | 71 | 463 | 71 | 449 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_177014.1 | 0 | 71 | 463 | 71 | 449 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270383.1 | 0 | 73 | 471 | 125 | 510 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300452.1 | 0 | 71 | 457 | 5 | 391 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336132.1 | 0 | 71 | 457 | 26 | 412 | predicted protein [Populus trichocarpa] |