| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10004962m |
| Family | GT14 |
| Protein Properties | Length: 447 Molecular Weight: 50124.9 Isoelectric Point: 7.8979 |
| Chromosome | Chromosome/Scaffold: 9 Start: 8504199 End: 8507952 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 120 | 352 | 0 |
| LAYLISGSAGDAARIVRLLHAVYHPKNQYLLHLDRSAPQAERDSLAVTIESVPVFRAAQNVDVIGKADFSYPAGSTSISSTLHGASILLKLSKNWDWFIN LNAADYPLIKQDDLLHILSYMPKELNFVNHTSYLDWRDSSRMKRIIVDPGLYLSEQNPMFYVSQKRQLPNAFRLFSDNLPRTLLMYLSNTPSSFPNYFPT ILCNSHQFNKTVINDSLLYVACDKPSKQNCTLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 447 Download |
| MLEKERNIKT THILQHNAIP IQIQQLTDNR ENLITMHHSS PSAPPSTPPS MSVPRDQTKA 60 TRSVLLTTLF FSLLFLVSFY STSSSSRRSI DSQTQSDPFL FPTRPAFPSK IPSHPAPPSL 120 AYLISGSAGD AARIVRLLHA VYHPKNQYLL HLDRSAPQAE RDSLAVTIES VPVFRAAQNV 180 DVIGKADFSY PAGSTSISST LHGASILLKL SKNWDWFINL NAADYPLIKQ DDLLHILSYM 240 PKELNFVNHT SYLDWRDSSR MKRIIVDPGL YLSEQNPMFY VSQKRQLPNA FRLFSDNLPR 300 TLLMYLSNTP SSFPNYFPTI LCNSHQFNKT VINDSLLYVA CDKPSKQNCT LNSTEFDDMI 360 QSGAIFASQF QFDDPVLDRI DREILNRSPG NVVPGGWCLG EPGNNTCSVW GDADILRPGP 420 GSRRLENRLI EMFSGGNFRS QQCILE* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam02485 | Branch | 2.0e-45 | 120 | 340 | 236 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. |
| PLN03183 | PLN03183 | 2.0e-113 | 103 | 443 | 371 | + acetylglucosaminyltransferase family protein; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80510.1 | 0 | 90 | 446 | 50 | 459 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_189046.1 | 0 | 97 | 446 | 50 | 417 | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein [Arabidopsis thaliana] |
| RefSeq | XP_002282998.1 | 0 | 92 | 446 | 52 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299292.1 | 0 | 64 | 446 | 26 | 428 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518166.1 | 0 | 49 | 446 | 21 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.000005 | 136 | 227 | 101 | 186 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.000005 | 136 | 227 | 101 | 186 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.000005 | 136 | 227 | 101 | 186 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.000005 | 136 | 227 | 101 | 186 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.000008 | 136 | 227 | 101 | 186 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
