Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10005181m |
Family | GH17 |
Protein Properties | Length: 378 Molecular Weight: 41686.5 Isoelectric Point: 6.293 |
Chromosome | Chromosome/Scaffold: 9 Start: 21304799 End: 21306666 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 64 | 376 | 0 |
IGVCYGMLGDNLPSKPDVIALYNQNNIRRMRLYDPNKEVLEALRGSNIEVLLGLPNDKLQIIASNQAEANTWVQDNIQNFVNNVKFKYIAVGNEAKPGDN FAQYLVPAMRNIQNAINGANLGSQIKVSTAIEFGALEVSSPPSAGSFKQAYRPILDPVITFLNENKSPLLVNLYPYFAIDGDRQISLDYALFRSQQPVVS DPPLSYRNLFDAQLDATYAALEKAGGGSLDIVISESGWPTAGGDGALTNVDNARTYNNNLIQHVKQGSPKKPGRPIETYIFAMFDEKDKQGAEIERHWGL FAPDKQPKYQVNF |
Full Sequence |
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Protein Sequence Length: 378 Download |
MVHGYGDFLY KRAAQKCCWY PTFPFAFFSL AKFLSSLNTP PMVSVVLLLL GLLVATLDTT 60 SAQIGVCYGM LGDNLPSKPD VIALYNQNNI RRMRLYDPNK EVLEALRGSN IEVLLGLPND 120 KLQIIASNQA EANTWVQDNI QNFVNNVKFK YIAVGNEAKP GDNFAQYLVP AMRNIQNAIN 180 GANLGSQIKV STAIEFGALE VSSPPSAGSF KQAYRPILDP VITFLNENKS PLLVNLYPYF 240 AIDGDRQISL DYALFRSQQP VVSDPPLSYR NLFDAQLDAT YAALEKAGGG SLDIVISESG 300 WPTAGGDGAL TNVDNARTYN NNLIQHVKQG SPKKPGRPIE TYIFAMFDEK DKQGAEIERH 360 WGLFAPDKQP KYQVNFN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 284 | 368 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-152 | 64 | 376 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL30426.1 | 0 | 30 | 377 | 1 | 343 | AF435089_1 beta-1,3-glucanase [Prunus persica] |
GenBank | AAY40462.1 | 0 | 42 | 377 | 1 | 336 | beta-1,3-glucanase class III [Citrus clementina x Citrus reticulata] |
GenBank | ABQ45848.1 | 0 | 42 | 377 | 1 | 337 | beta-1,3-glucanase [Citrus unshiu] |
GenBank | ACY06774.1 | 0 | 42 | 376 | 9 | 341 | glucanase [Litchi chinensis] |
EMBL | CAA03908.1 | 0 | 42 | 377 | 1 | 336 | beta-1,3-glucanase [Citrus sinensis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 63 | 377 | 1 | 316 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_C | 0 | 63 | 377 | 1 | 316 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_B | 0 | 63 | 377 | 1 | 316 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3f55_A | 0 | 63 | 377 | 1 | 316 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3em5_D | 0 | 63 | 377 | 1 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY263355 | 341 | 38 | 378 | 0 |
DY281576 | 340 | 38 | 376 | 0 |
DY267887 | 329 | 38 | 366 | 0 |
FC903334 | 304 | 38 | 341 | 0 |
DY293213 | 335 | 38 | 370 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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