Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10005324m |
Family | GH17 |
Protein Properties | Length: 349 Molecular Weight: 37944.2 Isoelectric Point: 5.801 |
Chromosome | Chromosome/Scaffold: 9 Start: 3577836 End: 3579177 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 346 | 0 |
VGINYGRLGNNLPPPARVVEFLTKDLNYAIPSVRIFDPEPEVLSALATSNLSVCLGVKNQDLAQMAGSMDYTRNWVREFVTPYTKGGNGTLKLRYITAGN EIIPGTEAVCVLPAMKNIQQVLEQENVPNVGVSTVLSAAALGSSYPPSNGSFATEVATTLNEISKFVYSKGAPLMINVYPYFTLASDPQQVTLDYASFRS TTPVAQDGDRNYFNLFDSIVDSFIAAMVKAVGKEDVKVVVTETGWPSAGSNLPHASVENAKTYNSNLKKHIQTLGGTPRRPNLNLETFIFALFNENQKPE GTEQNFGSFYPNLQEVYPL |
Full Sequence |
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Protein Sequence Length: 349 Download |
MKTTMAIKVM LLAMALSHDS MAFGAGTVGI NYGRLGNNLP PPARVVEFLT KDLNYAIPSV 60 RIFDPEPEVL SALATSNLSV CLGVKNQDLA QMAGSMDYTR NWVREFVTPY TKGGNGTLKL 120 RYITAGNEII PGTEAVCVLP AMKNIQQVLE QENVPNVGVS TVLSAAALGS SYPPSNGSFA 180 TEVATTLNEI SKFVYSKGAP LMINVYPYFT LASDPQQVTL DYASFRSTTP VAQDGDRNYF 240 NLFDSIVDSF IAAMVKAVGK EDVKVVVTET GWPSAGSNLP HASVENAKTY NSNLKKHIQT 300 LGGTPRRPNL NLETFIFALF NENQKPEGTE QNFGSFYPNL QEVYPLWR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-7 | 201 | 339 | 147 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-104 | 28 | 346 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10385.1 | 0 | 10 | 344 | 10 | 337 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | ABN05913.1 | 0 | 3 | 346 | 2 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
EMBL | CBI33865.1 | 0 | 7 | 344 | 8 | 336 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277609.1 | 0 | 10 | 344 | 1 | 324 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315775.1 | 0 | 29 | 348 | 1 | 316 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 346 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 346 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 346 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 28 | 346 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 28 | 346 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |