Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10006479m |
Family | GH17 |
Protein Properties | Length: 322 Molecular Weight: 34925.6 Isoelectric Point: 4.4067 |
Chromosome | Chromosome/Scaffold: 9 Start: 29048225 End: 29049190 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 11 | 319 | 0 |
IGVNYGLLGNNLPSADQVIALIKSNKINKVRIFQPYQGVLQTLKDSNLEVVLGTLNEDLQQLATDQSFAANWVKDNVLAYIPSVKFRYITLGNEVIPGQY ANFVYDAMQNVQNALKAANVNVPVTTVVSYAVLGSSYPPSNASFGQDSSAAMSKIVPFLQQNQYPLLANVYPCFAYFGEPTTIDADYALGNPNASFVYDG TLSYNNMFDAMIDAMYVALEKVGGNGVKIVVSETGWPSAGADLATTNNAKTYVNNVIQRVLTGKGTPKRPETPLEAYIFALFNENQKPAGTEQNFGLFYP DMTPVYPVN |
Full Sequence |
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Protein Sequence Length: 322 Download |
MYVVDVGAQV IGVNYGLLGN NLPSADQVIA LIKSNKINKV RIFQPYQGVL QTLKDSNLEV 60 VLGTLNEDLQ QLATDQSFAA NWVKDNVLAY IPSVKFRYIT LGNEVIPGQY ANFVYDAMQN 120 VQNALKAANV NVPVTTVVSY AVLGSSYPPS NASFGQDSSA AMSKIVPFLQ QNQYPLLANV 180 YPCFAYFGEP TTIDADYALG NPNASFVYDG TLSYNNMFDA MIDAMYVALE KVGGNGVKIV 240 VSETGWPSAG ADLATTNNAK TYVNNVIQRV LTGKGTPKRP ETPLEAYIFA LFNENQKPAG 300 TEQNFGLFYP DMTPVYPVNI V* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 185 | 311 | 135 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-119 | 11 | 319 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC39322.1 | 0 | 11 | 319 | 2 | 322 | endo-1,3-beta-glucanase [Hordeum vulgare subsp. vulgare] |
GenBank | AAD10384.1 | 0 | 7 | 319 | 22 | 333 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
EMBL | CBI33865.1 | 0 | 8 | 321 | 25 | 341 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001044540.1 | 0 | 7 | 319 | 22 | 334 | Os01g0801500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002277609.1 | 0 | 4 | 321 | 9 | 329 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 11 | 320 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 11 | 320 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 11 | 320 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 11 | 320 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 11 | 320 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY278959 | 325 | 1 | 319 | 0 |
DY932502 | 305 | 11 | 311 | 0 |
DY932509 | 307 | 7 | 309 | 0 |
DC899652 | 323 | 7 | 318 | 0 |
HO781618 | 313 | 11 | 317 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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