Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10006634m |
Family | GH17 |
Protein Properties | Length: 329 Molecular Weight: 36909.1 Isoelectric Point: 5.6752 |
Chromosome | Chromosome/Scaffold: 9 Start: 3576033 End: 3577019 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 13 | 326 | 0 |
VGINYGREGDNLPSPKQVIDFLTKNFSNKIGLIRIYDANIEILEALSGTNLVVTIGVPNEAINYVASSQDAADKWVQDHIITYVRKGVRFRYLCVGNEVI PGILATCVEPAIMNLHNSVRKAGYDFIFVTTAVAANVLGTSYPPSQGQFAPDVADVMSSITHCLYSLGSPLLINVYPYYALVEDPVHIPFEYALFTSRTP IRDGHLEYYNLFDAMVDAFVAAMVRVVQREDVKLVVSETGWPTDGRIGYAITDYARTYNNKLREHAIVSGRTPRKADINLEVYIFAMFNEDLKTPEEEKN FGTFYPNFTEKYPL |
Full Sequence |
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Protein Sequence Length: 329 Download |
RRKFINVFAG GDVGINYGRE GDNLPSPKQV IDFLTKNFSN KIGLIRIYDA NIEILEALSG 60 TNLVVTIGVP NEAINYVASS QDAADKWVQD HIITYVRKGV RFRYLCVGNE VIPGILATCV 120 EPAIMNLHNS VRKAGYDFIF VTTAVAANVL GTSYPPSQGQ FAPDVADVMS SITHCLYSLG 180 SPLLINVYPY YALVEDPVHI PFEYALFTSR TPIRDGHLEY YNLFDAMVDA FVAAMVRVVQ 240 REDVKLVVSE TGWPTDGRIG YAITDYARTY NNKLREHAIV SGRTPRKADI NLEVYIFAMF 300 NEDLKTPEEE KNFGTFYPNF TEKYPLWR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.003 | 244 | 319 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-88 | 13 | 326 | 316 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05913.1 | 0 | 13 | 326 | 27 | 335 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 12 | 326 | 28 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
EMBL | CBI33865.1 | 0 | 10 | 324 | 25 | 336 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002277609.1 | 0 | 10 | 324 | 13 | 324 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315775.1 | 0 | 14 | 328 | 1 | 316 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 13 | 328 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 12 | 326 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 12 | 326 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 12 | 326 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 12 | 326 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC899652 | 327 | 8 | 329 | 0 |
DY932502 | 315 | 13 | 323 | 0 |
FC903470 | 254 | 8 | 257 | 0 |
CV719758 | 259 | 3 | 257 | 0 |
DY274311 | 266 | 8 | 268 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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