PlantCAZyme

Basic Information
Species	Citrus clementina
Cazyme ID	Ciclev10006662m
Family	GH9
Protein Properties	Length: 453 Molecular Weight: 50638.2 Isoelectric Point: 8.1123
Chromosome	Chromosome/Scaffold: 9 Start: 27608189 End: 27610122
Description	glycosyl hydrolase 9B1
View CDS

External Links
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH9	17	443	0
EQFQVDLVGGYYDAGDNIKFSFPMAFTTTMLAWSILEFGSHMGPEQKNAQEALKWGTDYFLKATSVPGKVIAQVGEPNADHNCWERPEDMDTPRTSYVVN TTNPGSEVSAEIAAALAASSIVFKSVNSQYSKILLQRASQVFQFADQYQGSYNTSVGSGVCPYYCDFDGYMDELIWAAAWLFKATNRQSYMKYVVDNIHY LENSTMRQSKEALFVGGSFAEFGWDAKHAGINVLISRLVMNTSRSDPFVRHADKFICSVLPESPTKLVTYSSGGLLFKPGGSNSQHVTAMSFLLLVYSRY LTRFHRSLECGNIAVTPSRLIQVSKTQADYLLGSNPLSMSYMVGYGRKFPRRIHHRGSSLPSIDTHPKHVKCLEGSIFFKSKYPNFNLLTGAIVGGPDIN DQYNDTRINWSQSEPTTYINAPFVGVL

Full Sequence
Protein Sequence Length: 453 Download
MNIQFSDNKT RLQYFGEQFQ VDLVGGYYDA GDNIKFSFPM AFTTTMLAWS ILEFGSHMGP 60 EQKNAQEALK WGTDYFLKAT SVPGKVIAQV GEPNADHNCW ERPEDMDTPR TSYVVNTTNP 120 GSEVSAEIAA ALAASSIVFK SVNSQYSKIL LQRASQVFQF ADQYQGSYNT SVGSGVCPYY 180 CDFDGYMDEL IWAAAWLFKA TNRQSYMKYV VDNIHYLENS TMRQSKEALF VGGSFAEFGW 240 DAKHAGINVL ISRLVMNTSR SDPFVRHADK FICSVLPESP TKLVTYSSGG LLFKPGGSNS 300 QHVTAMSFLL LVYSRYLTRF HRSLECGNIA VTPSRLIQVS KTQADYLLGS NPLSMSYMVG 360 YGRKFPRRIH HRGSSLPSID THPKHVKCLE GSIFFKSKYP NFNLLTGAIV GGPDINDQYN 420 DTRINWSQSE PTTYINAPFV GVLSYFKAYP HP* 480

Full Sequence

Protein Sequence Length: 453 Download

MNIQFSDNKT RLQYFGEQFQ VDLVGGYYDA GDNIKFSFPM AFTTTMLAWS ILEFGSHMGP    60
EQKNAQEALK WGTDYFLKAT SVPGKVIAQV GEPNADHNCW ERPEDMDTPR TSYVVNTTNP    120
GSEVSAEIAA ALAASSIVFK SVNSQYSKIL LQRASQVFQF ADQYQGSYNT SVGSGVCPYY    180
CDFDGYMDEL IWAAAWLFKA TNRQSYMKYV VDNIHYLENS TMRQSKEALF VGGSFAEFGW    240
DAKHAGINVL ISRLVMNTSR SDPFVRHADK FICSVLPESP TKLVTYSSGG LLFKPGGSNS    300
QHVTAMSFLL LVYSRYLTRF HRSLECGNIA VTPSRLIQVS KTQADYLLGS NPLSMSYMVG    360
YGRKFPRRIH HRGSSLPSID THPKHVKCLE GSIFFKSKYP NFNLLTGAIV GGPDINDQYN    420
DTRINWSQSE PTTYINAPFV GVLSYFKAYP HP*                                 480

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
PLN02175	PLN02175	5.0e-149	16	448	436	+ endoglucanase
pfam00759	Glyco_hydro_9	1.0e-152	16	444	435	+ Glycosyl hydrolase family 9.
PLN02266	PLN02266	7.0e-179	16	446	433	+ endoglucanase
PLN03009	PLN03009	5.0e-180	16	452	442	+ cellulase
PLN02308	PLN02308	0	16	452	439	+ endoglucanase

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
RefSeq	XP_002264822.1	0	16	450	55	494	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002321833.1	0	16	452	48	486	predicted protein [Populus trichocarpa]
RefSeq	XP_002321834.1	0	16	448	65	488	predicted protein [Populus trichocarpa]
RefSeq	XP_002510937.1	0	16	450	65	500	endo-1,4-beta-glucanase, putative [Ricinus communis]
RefSeq	XP_002510938.1	0	16	452	65	503	endo-1,4-beta-glucanase, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ksd_A	0	16	444	42	426	A Chain A, The Structure Of Soybean Peroxidase
PDB	1ksc_A	0	16	444	42	426	A Chain A, The Structure Of Soybean Peroxidase
PDB	1ks8_A	0	16	444	42	426	A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.
PDB	4tf4_B	0	16	444	42	438	A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.
PDB	4tf4_A	0	16	444	42	438	A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.

EST Download unfiltered results here

Hit	Length	Start	End	EValue
HO788388	413	43	449	0
DT762304	282	171	450	0
FE521031	299	92	388	0
DT762654	267	186	450	0
DY296968	350	73	420	0

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_037_00141.2	Aquca_037_00141.1.27.488	Aquca_032_00063.1	Aquca_002_01464.1.25.486	Aquca_032_00063.2
	Aquca_003_00343.1	Aquca_037_00054.1	Aquca_002_00269.1	Aquca_020_00499.1	Aquca_091_00045.1
	Aquca_009_00142.1	Aquca_037_00250.2	Aquca_037_00053.1	Aquca_037_00052.1	Aquca_037_00250.1
	Aquca_013_00114.1.225.506	Aquca_013_00114.1.225.506	Aquca_013_00683.1	Aquca_017_00132.1	Aquca_008_00102.1
	Aquca_007_00351.1	Aquca_013_00682.1	Aquca_001_00802.1	Aquca_091_00045.2	Aquca_007_00351.2
	Aquca_017_00132.2	Aquca_037_00250.3
Arabidopsis lyrata	489943.26.487	892975.25.486	856281	482241	474038.30.491
	346267	483586	903880	894888	335563
	327156	492512	912356	484821	352898
	490341	887421	476269	335523	490669
Arabidopsis thaliana	AT4G11050.1.26.487	AT1G64390.1.25.486	AT2G32990.1	AT1G48930.1.30.491	AT2G44550.1
	AT2G44540.1	AT2G44570.1	AT2G44560.1	AT1G70710.1	AT1G23210.1
	AT4G23560.1	AT4G39010.1	AT3G43860.1	AT4G09740.1	AT4G39000.1
	AT4G02290.1	AT1G02800.1	AT1G71380.1	AT1G22880.1	AT1G22880.2
	AT4G38990.1
Brachypodium distachyon	Bradi2g32270.1.30.492	Bradi2g07150.1.24.489	Bradi4g29640.1	Bradi3g36210.1	Bradi3g59810.1
	Bradi1g44430.1	Bradi3g04080.1	Bradi5g26010.1	Bradi3g34787.1	Bradi4g33760.1
	Bradi1g54580.1	Bradi1g44110.1	Bradi2g38357.1	Bradi4g35970.1	Bradi2g11870.1
	Bradi5g11310.1	Bradi3g57190.1
Brassica rapa	Bra027735.24.485	Bra027699.25.486	Bra005536	Bra021821	Bra018765.30.491
	Bra032270.30.491	Bra004844	Bra004845	Bra004846	Bra016192
	Bra000354	Bra003946	Bra024571	Bra019296	Bra013709
	Bra011881	Bra011882	Bra033591	Bra019455	Bra033592
	Bra036281	Bra032584	Bra018559	Bra012349	Bra007982
	Bra016143	Bra007983	Bra034983.33.286	Bra034983.33.286
Carica papaya	evm.TU.contig_27379.2.24.485	evm.model.supercontig_12.254	evm.model.supercontig_132.12	evm.model.supercontig_19.2	evm.model.supercontig_151.20
	evm.model.supercontig_2.231	evm.model.supercontig_180.8	evm.model.supercontig_150.21	evm.model.supercontig_126.11	evm.model.supercontig_3.308
	evm.model.supercontig_21.97	evm.model.supercontig_3.307
Capsella rubella	Carubv10003874m.27.488	Carubv10019981m.25.486	Carubv10022977m	Carubv10012624m.30.491	Carubv10023082m
	Carubv10015060m	Carubv10020190m	Carubv10007690m	Carubv10006388m	Carubv10010959m
	Carubv10004652m	Carubv10006679m	Carubv10019329m	Carubv10011914m	Carubv10000741m
	Carubv10011645m	Carubv10022009m	Carubv10006564m
Citrus clementina	Ciclev10019301m.22.483	Ciclev10007984m	Ciclev10014884m	Ciclev10033912m.95.555	Ciclev10023813m
	Ciclev10014994m	Ciclev10019602m	Ciclev10019799m	Ciclev10010487m	Ciclev10004817m
	Ciclev10019883m	Ciclev10028301m	Ciclev10007163m	Ciclev10004877m
Citrus sinensis	orange1.1g009760m	orange1.1g006835m.22.483	orange1.1g036785m	orange1.1g009690m	orange1.1g043219m.25.485
	orange1.1g042201m	orange1.1g010632m	orange1.1g010522m	orange1.1g037588m	orange1.1g047277m
	orange1.1g048705m	orange1.1g011252m	orange1.1g015542m	orange1.1g012581m	orange1.1g015354m
	orange1.1g016484m	orange1.1g022932m
Cucumis sativus	Cucsa.107370.1.24.485	Cucsa.303850.1.26.487	Cucsa.185030.1	Cucsa.042810.1	Cucsa.128330.1.26.485
	Cucsa.362420.1	Cucsa.280220.1	Cucsa.055980.1	Cucsa.205360.1	Cucsa.303540.1
	Cucsa.322580.1	Cucsa.237360.1	Cucsa.096960.1	Cucsa.109130.1	Cucsa.280220.2
	Cucsa.129230.1
Eucalyptus grandis	Eucgr.D01733.1.31.492	Eucgr.E00858.2	Eucgr.E00858.1.26.487	Eucgr.F00710.1	Eucgr.K00765.1
	Eucgr.J00862.1.11.469	Eucgr.E01717.1	Eucgr.E01715.1	Eucgr.H01095.1	Eucgr.D01675.1
	Eucgr.B02944.1	Eucgr.D01810.1	Eucgr.I01325.1	Eucgr.A02886.1	Eucgr.F02941.1
	Eucgr.A02885.1	Eucgr.G01728.1	Eucgr.C00736.1
Fragaria vesca	mrna32087.1-v1.0-hybrid.131.592	mrna03442.1-v1.0-hybrid	mrna01234.1-v1.0-hybrid	mrna11058.1-v1.0-hybrid.32.492	mrna03017.1-v1.0-hybrid
	mrna00816.1-v1.0-hybrid	mrna15488.1-v1.0-hybrid	mrna31843.1-v1.0-hybrid	mrna01891.1-v1.0-hybrid	mrna11076.1-v1.0-hybrid
	mrna01563.1-v1.0-hybrid	mrna31222.1-v1.0-hybrid	mrna31223.1-v1.0-hybrid	mrna31225.1-v1.0-hybrid	mrna21255.1-v1.0-hybrid
	mrna21252.1-v1.0-hybrid	mrna21253.1-v1.0-hybrid	mrna21254.1-v1.0-hybrid
Glycine max	Glyma05g36930.1.25.486	Glyma08g02610.1.26.487	Glyma14g02340.1	Glyma02g46320.2	Glyma02g43680.1
	Glyma12g03050.1.27.488	Glyma11g10760.1.27.488	Glyma14g05200.2	Glyma14g05200.3	Glyma20g00540.1
	Glyma02g01990.1	Glyma10g02130.1	Glyma03g37420.1	Glyma08g04840.1	Glyma18g03470.1
	Glyma05g34850.1	Glyma11g02350.1	Glyma04g01030.1	Glyma06g01060.2	Glyma06g43020.1
	Glyma11g11910.3	Glyma12g00740.1	Glyma06g48140.1	Glyma04g12290.1	Glyma09g36620.2
	Glyma12g00750.1	Glyma06g05950.2	Glyma06g05950.1	Glyma19g40030.2	Glyma12g00740.2
	Glyma06g43010.2
Gossypium raimondii	Gorai.004G133700.4	Gorai.004G133700.3	Gorai.004G133700.2	Gorai.004G133700.1.29.490	Gorai.008G254000.2
	Gorai.008G254000.1.27.488	Gorai.003G080800.4	Gorai.003G080800.3	Gorai.003G080800.2	Gorai.003G080800.1.25.486
	Gorai.003G080800.5	Gorai.007G170600.2	Gorai.007G170600.1	Gorai.001G095700.1	Gorai.002G092400.1
	Gorai.005G210200.2	Gorai.005G210200.1.25.485	Gorai.002G092400.2	Gorai.002G175700.1	Gorai.005G160300.1
	Gorai.003G077300.1	Gorai.010G092700.1	Gorai.008G250400.1	Gorai.004G286200.1	Gorai.013G032600.1
	Gorai.007G126900.1	Gorai.009G290800.1	Gorai.008G031800.1	Gorai.001G048100.1	Gorai.002G175700.2
	Gorai.005G160300.2	Gorai.002G175700.3	Gorai.002G175700.4	Gorai.002G175700.6	Gorai.002G175700.5
	Gorai.001G048100.2
Linum usitatissimum	Lus10001833.23.483	Lus10032377.23.484	Lus10003888.23.484	Lus10033957	Lus10035316
	Lus10009724	Lus10010201.33.494	Lus10017402.33.467	Lus10008208	Lus10017525
	Lus10029071	Lus10031718	Lus10001666	Lus10018077	Lus10042071
	Lus10027205	Lus10031139	Lus10038223	Lus10002930	Lus10027201
	Lus10034199	Lus10009794	Lus10038075	Lus10031090	Lus10013418
	Lus10010307.109.389	Lus10010307.109.389	Lus10017338
Malus domestica	MDP0000276676.27.488	MDP0000131267.27.488	MDP0000289626	MDP0000252536	MDP0000286362
	MDP0000826600.33.492	MDP0000561662	MDP0000131397	MDP0000285589	MDP0000188750
	MDP0000561477	MDP0000740981	MDP0000199273	MDP0000173809	MDP0000130290
	MDP0000285057	MDP0000276241	MDP0000722052.16.241	MDP0000269126
Manihot esculenta	cassava4.1_003698m.27.488	cassava4.1_033958m	cassava4.1_029944m	cassava4.1_008304m	cassava4.1_006175m
	cassava4.1_006262m	cassava4.1_029045m	cassava4.1_006236m	cassava4.1_023270m	cassava4.1_005953m
	cassava4.1_006449m	cassava4.1_023327m	cassava4.1_013066m	cassava4.1_023334m	cassava4.1_004404m.206.458
	cassava4.1_004404m.206.458
Medicago truncatula	Medtr5g085730.1	Medtr3g080190.1	Medtr4g074960.1.28.515	Medtr5g009970.1	Medtr8g067400.1
	Medtr3g080810.1	Medtr5g010000.1	Medtr8g104820.1	Medtr3g105230.1	Medtr5g093590.1.208.568
	Medtr5g093590.1.208.568	Medtr3g117500.1	Medtr3g010330.1	Medtr1g088190.1	Medtr1g088190.2
	Medtr5g009970.2
Mimulus guttatus	mgv1a004112m	mgv1a004582m	mgv1a003302m.29.489	mgv1a025805m	mgv1a007113m
	mgv1a019325m	mgv1a005046m	mgv1a004581m	mgv1a005008m	mgv1a020424m
	mgv1a021529m	mgv1a005384m	mgv1a005134m	mgv1a004926m	mgv1a005277m
	mgv1a009571m
Oryza sativa	LOC_Os01g12070.1.40.503	LOC_Os05g12150.1.34.496	LOC_Os01g12030.1.41.508	LOC_Os02g50490.1	LOC_Os09g23084.1
	LOC_Os08g32940.1	LOC_Os02g05744.1	LOC_Os04g57860.1.38.502	LOC_Os01g21070.1	LOC_Os08g29770.1
	LOC_Os06g14540.1	LOC_Os02g03120.1	LOC_Os09g36060.1	LOC_Os02g50040.1	LOC_Os05g03840.1
	LOC_Os08g02220.1	LOC_Os04g36610.1	LOC_Os02g53820.2	LOC_Os02g53820.1	LOC_Os06g13830.1
Panicum virgatum	Pavirv00030375m.44.509	Pavirv00000152m.37.502	Pavirv00000772m.28.493	Pavirv00039239m	Pavirv00045176m
	Pavirv00043051m	Pavirv00029375m.30.493	Pavirv00002587m	Pavirv00022900m	Pavirv00053329m
	Pavirv00016221m	Pavirv00051185m	Pavirv00010434m	Pavirv00039198m	Pavirv00006123m
	Pavirv00025676m	Pavirv00070574m	Pavirv00061855m	Pavirv00039897m	Pavirv00064504m
	Pavirv00052831m	Pavirv00037663m	Pavirv00031272m	Pavirv00047835m	Pavirv00010413m
	Pavirv00008599m	Pavirv00017496m	Pavirv00046214m	Pavirv00047862m	Pavirv00044358m
	Pavirv00006362m	Pavirv00065946m	Pavirv00000791m
Physcomitrella patens	Pp1s37_355V6.1	Pp1s149_10V6.1	Pp1s176_127V6.1.36.498	Pp1s53_97V6.1	Pp1s376_19V6.1
	Pp1s100_161V6.1	Pp1s87_194V6.1	Pp1s100_137V6.1	Pp1s19_105V6.1	Pp1s80_46V6.1
	Pp1s170_4V6.1	Pp1s100_139V6.1	Pp1s20_387V6.1
Phaseolus vulgaris	Phvul.002G297600.1.25.486	Phvul.008G270900.1	Phvul.011G030300.1.27.489	Phvul.003G005700.1	Phvul.001G239900.1
	Phvul.002G160200.1	Phvul.007G218400.1	Phvul.002G318800.1	Phvul.009G003200.1	Phvul.001G209500.1
	Phvul.011G039400.1	Phvul.005G003100.1	Phvul.011G005600.1	Phvul.009G082800.1	Phvul.011G005400.1
	Phvul.011G005500.1	Phvul.011G005600.2	Phvul.008G212700.1
Picea abies	MA_42717g0010.22.483	MA_19509g0020.38.501	MA_127108g0010.12.464	MA_10437098g0010.23.459	MA_13829g0010
	MA_10430521g0010	MA_350239g0010	MA_16152g0010	MA_140507g0010	MA_5355g0010
	MA_10431918g0010	MA_76986g0010	MA_216572g0010	MA_14604g0010	MA_128094g0010
	MA_697188g0010	MA_480961g0010	MA_182379g0010	MA_195523g0010
Populus trichocarpa	Potri.003G139600.3	Potri.003G139600.2	Potri.003G139600.1.27.488	Potri.001G092200.3	Potri.001G092200.1.27.488
	Potri.014G157600.2	Potri.014G157600.1	Potri.001G356000.1	Potri.007G071200.2.27.487	Potri.007G071200.1.27.487
	Potri.001G092200.2	Potri.014G157600.3	Potri.010G109200.1	Potri.008G132700.1	Potri.001G083200.1
	Potri.006G219700.1	Potri.001G098800.1	Potri.015G128000.1	Potri.002G202400.1	Potri.014G126900.1
	Potri.019G069300.1	Potri.004G162200.1	Potri.019G069300.2	Potri.009G123900.1	Potri.015G127900.1
	Potri.002G202400.2	Potri.010G109200.2	Potri.003G147600.2	Potri.003G147600.1	Potri.008G132700.2
	Potri.008G132700.3	Potri.015G127900.2	Potri.002G225200.1
Prunus persica	ppa002939m.27.488	ppa016852m	ppa004172m	ppa022524m.32.490	ppa021556m
	ppa004644m	ppa025159m	ppa004653m	ppa004387m	ppa004970m
	ppa014785m	ppa005285m	ppa004719m	ppa019691m	ppa026537m
Ricinus communis	29762.m000498	29948.m000704	29675.m000388.28.488	29692.m000525	30068.m002585
	30190.m011277	30147.m014207	30147.m014206	29986.m001645	29739.m003631
	30131.m007125.25.315	30131.m007125.25.315
Setaria italica	Si000642m.41.504	Si021474m.29.487	Si015134m	Si016804m	Si006152m
	Si021476m.31.495	Si016857m	Si006422m	Si001159m	Si016976m
	Si013572m	Si012639m	Si016909m	Si006281m	Si013602m
	Si019460m	Si024756m	Si030063m	Si030488m
Selaginella moellendorffii	109529	234652.20.485	99802.32.506	85183	234337
	117027	266914	415162
Sorghum bicolor	Sb09g006670.1.28.493	Sb03g001560.1.45.512	Sb04g028520.1	Sb07g020700.1	Sb02g024050.1
	Sb04g003690.1	Sb06g032760.1.37.501	Sb07g019470.1	Sb02g030710.1	Sb04g028790.1
	Sb09g002490.1	Sb07g001480.1	Sb10g009270.1	Sb06g017600.1	Sb03g012840.1
	Sb04g001960.1	Sb04g034920.1	Sb10g008880.1
Thellungiella halophila	Thhalv10028514m.27.488	Thhalv10023353m.24.485	Thhalv10016495m	Thhalv10011318m.30.490	Thhalv10027553m
	Thhalv10001734m	Thhalv10018439m	Thhalv10007462m	Thhalv10025071m	Thhalv10027409m
	Thhalv10002503m	Thhalv10027420m	Thhalv10025010m	Thhalv10028585m	Thhalv10007402m
	Thhalv10018465m	Thhalv10001473m
Vitis vinifera	GSVIVT01019523001.30.491	GSVIVT01012043001.29.489	GSVIVT01030494001	GSVIVT01037709001	GSVIVT01032799001
	GSVIVT01032798001	GSVIVT01019420001	GSVIVT01035481001.517.964	GSVIVT01035481001.517.964	GSVIVT01035481001.32.475
	GSVIVT01035481001.32.475	GSVIVT01018619001	GSVIVT01028042001	GSVIVT01018617001	GSVIVT01037210001
	GSVIVT01019664001	GSVIVT01024179001
Zea mays	AC203408.4_FGT003

CAZyme Information