Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10006853m |
Family | AA5 |
Protein Properties | Length: 594 Molecular Weight: 66276.7 Isoelectric Point: 7.2906 |
Chromosome | Chromosome/Scaffold: 9 Start: 6692690 End: 6694776 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 69 | 593 | 0 |
EDEFKGKWELASENSGISAMHIILFPNTNKAIMLDAVSLGPSNVRLPVGIYRLNPGAWQKYVDYRALAVEYDAESAAIRPLKILTDTWSSSGGLSANGTV VISGGWSGRGRSVRYLSGCYHACYWKEHHWELSAKRWFSTQHILPDGSFIVVGGRREFSYEYILKEGKRIIYDLPILNETTNPSENNLYPFVFLSTDGNL FIFANDRSILLNPETNEILHVFPILRGGSRNYPASATSALLPIKLQDPNSNAIRAEVLICGGAKPEAGVLAGKGEFMNALQDCGRIEITNKSATWQREMM PSPRVMGEMLLLPTGDVLIINGAKKGTAGWNFATDPNTTPVLYEPDDQINERFSELTPTSKPRMCHSTSVVLPDGKILVAGSNPHSRYNLTSGSKYPTEL RIEKFYPPYFEESFASYRPSIVSKFKGKMVKYGQNFVIQFKLDELEVSSNDLKVTMYAPPFTTHGVSMGQRLLVLATKELIDVGSGIFQVSVMAPPTAKI APPSFYLLFVVYRQVPSPGTWVQIG |
Full Sequence |
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Protein Sequence Length: 594 Download |
MASYPKSLVL LPLTLCIFYI TSQLWHRQYY PHSRPLLKYP FDDDSNTNQD CDDGSCFKSR 60 DILENPDYED EFKGKWELAS ENSGISAMHI ILFPNTNKAI MLDAVSLGPS NVRLPVGIYR 120 LNPGAWQKYV DYRALAVEYD AESAAIRPLK ILTDTWSSSG GLSANGTVVI SGGWSGRGRS 180 VRYLSGCYHA CYWKEHHWEL SAKRWFSTQH ILPDGSFIVV GGRREFSYEY ILKEGKRIIY 240 DLPILNETTN PSENNLYPFV FLSTDGNLFI FANDRSILLN PETNEILHVF PILRGGSRNY 300 PASATSALLP IKLQDPNSNA IRAEVLICGG AKPEAGVLAG KGEFMNALQD CGRIEITNKS 360 ATWQREMMPS PRVMGEMLLL PTGDVLIING AKKGTAGWNF ATDPNTTPVL YEPDDQINER 420 FSELTPTSKP RMCHSTSVVL PDGKILVAGS NPHSRYNLTS GSKYPTELRI EKFYPPYFEE 480 SFASYRPSIV SKFKGKMVKY GQNFVIQFKL DELEVSSNDL KVTMYAPPFT THGVSMGQRL 540 LVLATKELID VGSGIFQVSV MAPPTAKIAP PSFYLLFVVY RQVPSPGTWV QIG* 600 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam09118 | DUF1929 | 3.0e-23 | 486 | 592 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. |
cd02851 | E_set_GO_C | 4.0e-26 | 486 | 592 | 108 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. |
pfam07250 | Glyoxal_oxid_N | 1.0e-85 | 88 | 330 | 246 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28031.1 | 0 | 66 | 592 | 95 | 622 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280698.1 | 0 | 66 | 592 | 119 | 646 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281387.1 | 0 | 1 | 592 | 1 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324431.1 | 0 | 73 | 592 | 1 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 1 | 592 | 1 | 608 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wq8_A | 0.000008 | 319 | 592 | 412 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eic_A | 0.00001 | 319 | 592 | 390 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 0.00001 | 319 | 592 | 390 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 0.00001 | 319 | 592 | 390 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz1_A | 0.00001 | 319 | 592 | 390 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |