Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10006922m |
Family | GH17 |
Protein Properties | Length: 366 Molecular Weight: 38753.3 Isoelectric Point: 5.0936 |
Chromosome | Chromosome/Scaffold: 9 Start: 29046068 End: 29047391 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 54 | 363 | 0 |
LGVNYGLLGDNLPTPDKVIDLIKSNKINKVRIFEPKQAVLQALKDSNLELALGTRNEDLQSLATDPSAATKFVQENVVAYSPGVKFSYITLGNEVIPGQY ANFVFDAMQNMQNALKAANVNVPVSTVVATSVLGSSYPPSNATFGQDASAVMEKIVSFLQQNQYPLLANVYTCFPYFAEPTNINADYALGNANVAKGVTD GSIHYNTMFDAMIDAVYVAMEKVGGKDVKLVVSETGWPSAGVNLATMDNAKAYVNNVIQRVSSGKGTPLRPSIPIEAYIFAMFNENQKPAGTEQNFGLFY PDMKPVYPVS |
Full Sequence |
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Protein Sequence Length: 366 Download |
MARLVLIFFI VACLKTVNVL AQGNAPTATP VGVGAATQGN IAAAPAGTSS LGGLGVNYGL 60 LGDNLPTPDK VIDLIKSNKI NKVRIFEPKQ AVLQALKDSN LELALGTRNE DLQSLATDPS 120 AATKFVQENV VAYSPGVKFS YITLGNEVIP GQYANFVFDA MQNMQNALKA ANVNVPVSTV 180 VATSVLGSSY PPSNATFGQD ASAVMEKIVS FLQQNQYPLL ANVYTCFPYF AEPTNINADY 240 ALGNANVAKG VTDGSIHYNT MFDAMIDAVY VAMEKVGGKD VKLVVSETGW PSAGVNLATM 300 DNAKAYVNNV IQRVSSGKGT PLRPSIPIEA YIFAMFNENQ KPAGTEQNFG LFYPDMKPVY 360 PVSIA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 278 | 355 | 85 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-104 | 66 | 363 | 301 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD10384.1 | 0 | 49 | 365 | 21 | 335 | beta-1,3-glucanase precursor [Oryza sativa Japonica Group] |
GenBank | ACF06549.1 | 0 | 39 | 362 | 17 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
GenBank | EAY98549.1 | 0 | 52 | 365 | 37 | 353 | hypothetical protein OsI_20461 [Oryza sativa Indica Group] |
RefSeq | NP_001044540.1 | 0 | 49 | 365 | 21 | 336 | Os01g0801500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001055934.1 | 0 | 52 | 365 | 31 | 347 | Os05g0495900 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 54 | 364 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 54 | 360 | 2 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 54 | 360 | 2 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 54 | 360 | 2 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 54 | 360 | 2 | 311 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |