CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10007054m
FamilyCBM57
Protein PropertiesLength: 963 Molecular Weight: 106223 Isoelectric Point: 6.1243
ChromosomeChromosome/Scaffold: 9 Start: 30707234 End: 30713317
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM573705404.8e-29
  AIKSGGRQIRSSNGVVYERDNETLGPATYYVTDSDNWGVSNVGLFTGSNNPQYKSSSLSQFTNTLDSELFQTARLSASSLRYYGLGLENGNYTVLLQFAE
  MAILDTNRWESLGRRVFDVYIQGNRVLKDFDIKREAGGVSKRAIQREIKTRVSENYLEIHLFWAGKGTCCV
Full Sequence
Protein Sequence     Length: 963     Download
QNRTQATTDP NEGQWNRSGD PCTGAALDDS IVFDNTDYNP FIKCDCSSQN GTVCHITQLK    60
VYALNVVGVI PDELWNLTSL FNLNLGQNYL TGPLSPSVGN LTAMQYLNLA INALSGELPK    120
ELGQLTELLI LGIGTNNFSG PLPSELGSLS KLQELYIDSA GVSGEIPSSF ANLQSLTKWW    180
ASDTRLTGRI PDFIGNWSKL TALRFQGNSF NGPIPSSFSN LTSLTELRIS DLSNGSSKLA    240
FIRDMKSLSI LELRNNNISD SIPSNIGEYR SLQHLDLSFN NLGGSIPDSL FNLSSLTHLF    300
LGNNKLNGTL PARKSPLLLN IDVSYNNLQG NLPSWINGQQ NLQIVLPRGL ICLQRNFPCN    360
RGYAIYADFA IKSGGRQIRS SNGVVYERDN ETLGPATYYV TDSDNWGVSN VGLFTGSNNP    420
QYKSSSLSQF TNTLDSELFQ TARLSASSLR YYGLGLENGN YTVLLQFAEM AILDTNRWES    480
LGRRVFDVYI QGNRVLKDFD IKREAGGVSK RAIQREIKTR VSENYLEIHL FWAGKGTCCV    540
PAQDFTPTVR PPKEKDNNRT GLIVGIVVGV GVATFLSVLA IFCIVRRRKR PQHDDDEELL    600
GMDARPYTFS YAELKTATEN FSPSNKLGEG GFGPVYKGKL GDGRAIAVKQ LSVASRQGKS    660
QFVAEIATIS AVQHRNLVKL HGCCIEGAER LLVYEYLENK SLDQALFGQR SLNLDWATRY    720
EICSGVARGL AYLHEESRVR IIHRDVKASN VLLDADLVPK ISDFGLAKLY DDKKTHISTR    780
VAGTIGYLAP EYAMRGHLTE KTDVFAFGVL ALETVSGRPN SDPSLDEEKL YLLEWAWHLH    840
ENNQEIELAD PKLIEFNEEE VKRLIGVALL CTQTLPSLRP SMSRVVAMLC GDMEVSTVTA    900
KPGYLTDWKF DDITSFVRTD EATKGTDTSH YTSSSSTSIV AEAEHLSRNG KPLLHDLVGE    960
GR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00180PKc4.0e-46627813191+
smart00221STYKc4.0e-48626810191+
smart00219TyrKc8.0e-49626810191+
cd00192PTKc7.0e-50625889282+
pfam11721Malectin3.0e-54369543176+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI20016.1069501041092unnamed protein product [Vitis vinifera]
RefSeqXP_002267129.106962381031PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002267672.106962381028PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002310677.105962491036predicted protein [Populus trichocarpa]
RefSeqXP_002513383.101962221016ATP binding protein, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3tl8_H05878921317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G05878921317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D05878921317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_A05878921317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3ulz_A05918925309B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
563585
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DT5531062856058890
GT1786952726469170
FE6926902855588420
DN1725172656469100
DY9778633005738680
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038mCiclev10014641m
Ciclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013608001GSVIVT01013612001
GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)