| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10007163m |
| Family | GH9 |
| Protein Properties | Length: 482 Molecular Weight: 53784.5 Isoelectric Point: 5.2868 |
| Chromosome | Chromosome/Scaffold: 9 Start: 27560838 End: 27563947 |
| Description | glycosyl hydrolase 9B1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 5 | 473 | 0 |
| DYGDALSKCILFFEGQRSGKLPSTQRMTWRKDSALSDGSDVGVDLVGGYYDAGDNIKFSFPMAFSTTMQAWSILEFGHLMGSEHENALESLKWSTDYFLK ATSVPGKVVAAVGNPKGDHNCWERPEDMDIPRTSYLVNTTKPGSEVSAEIAAALAASSMVFKSVDSQYSNLLLQRAFQVFQFADQYQGSYNYSVGEGVCP FYCDYDGYMDELIWGAAWLFKATNEQKYWNYVVENIHFLENSVETESNKAVYVGGCFADFGWDGKNAGINVLISRWVMNTSKSDPFVSYADKFFCTVLPE SPTRWVTYSPGGLMFKYGAKSIVNSQHVTATSFLLLVYSQYLTMFNRNFQCGDVAVSPSRLVQLAKVQVDYVLGSNSMGMSFMVGYGQKFPQRIHHRGST LPSIDKYPKRLKCHDGDEFFETKDPNLNVLTGAIVGGPDINDKFEDDRSNWKQSEPTTYINAPFVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| VASHDYGDAL SKCILFFEGQ RSGKLPSTQR MTWRKDSALS DGSDVGVDLV GGYYDAGDNI 60 KFSFPMAFST TMQAWSILEF GHLMGSEHEN ALESLKWSTD YFLKATSVPG KVVAAVGNPK 120 GDHNCWERPE DMDIPRTSYL VNTTKPGSEV SAEIAAALAA SSMVFKSVDS QYSNLLLQRA 180 FQVFQFADQY QGSYNYSVGE GVCPFYCDYD GYMDELIWGA AWLFKATNEQ KYWNYVVENI 240 HFLENSVETE SNKAVYVGGC FADFGWDGKN AGINVLISRW VMNTSKSDPF VSYADKFFCT 300 VLPESPTRWV TYSPGGLMFK YGAKSIVNSQ HVTATSFLLL VYSQYLTMFN RNFQCGDVAV 360 SPSRLVQLAK VQVDYVLGSN SMGMSFMVGY GQKFPQRIHH RGSTLPSIDK YPKRLKCHDG 420 DEFFETKDPN LNVLTGAIVG GPDINDKFED DRSNWKQSEP TTYINAPFVG VLAYFKVYPN 480 S* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02175 | PLN02175 | 2.0e-149 | 2 | 475 | 477 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 2.0e-155 | 5 | 473 | 475 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 1.0e-180 | 2 | 481 | 488 | + cellulase | ||
| PLN02308 | PLN02308 | 0 | 2 | 480 | 482 | + endoglucanase | ||
| PLN02266 | PLN02266 | 0 | 1 | 475 | 477 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002264822.1 | 0 | 1 | 481 | 14 | 496 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321833.1 | 0 | 1 | 479 | 7 | 484 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321834.1 | 0 | 3 | 476 | 26 | 487 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510937.1 | 0 | 1 | 480 | 24 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| RefSeq | XP_002510938.1 | 0 | 1 | 480 | 24 | 502 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 3 | 473 | 2 | 426 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 1ksc_A | 0 | 3 | 473 | 2 | 426 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |
| PDB | 1ks8_A | 0 | 3 | 473 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 5 | 473 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 5 | 473 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO788388 | 413 | 69 | 475 | 0 |
| DT762304 | 285 | 197 | 479 | 0 |
| DY296968 | 353 | 99 | 448 | 0 |
| ES791832 | 315 | 163 | 475 | 0 |
| DT762654 | 270 | 212 | 479 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
