Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10007698m |
Family | GT47 |
Protein Properties | Length: 653 Molecular Weight: 74042.5 Isoelectric Point: 8.1508 |
Chromosome | Chromosome/Scaffold: 1 Start: 3125594 End: 3128287 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 316 | 603 | 0 |
ETLKVYVYKEGQRPILHEPVLKGIYASEGWFMKQLEANKQFVTKDSRKAHLFYLPFSSRMLEETLYVQNSHNHKNLIQYLRNYVNLISAKHNFWNRTEGA DHFLVACHDWAPAETRIIMANCIRALCNSDVKQGFVFGKDVSLPETNVLSPQNPLWAIGGKPASQRSILAFFAGSMHGYLRPILLHHWENKDPDMKIFGQ MPKAKGRGKRKGKMDYIQHMKSSKYCICAKGYEVHSPRVVEAIFYECVPVIISDNFVPPFFEILNWESFAVFVLEKDIPNLKNILLSI |
Full Sequence |
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Protein Sequence Length: 653 Download |
MGYEIRSLFQ GETKRLLWLM GIMLTVIVAF QYFELPYDHV LSSVFSTGKV PAPAVENNSL 60 VTGGPESKSE IASDTANGLN STGTHNVHEM ANDTRTSKAE DANLQDDFYD GEDNHEEPMT 120 EKLEELNKNS TVDTVQNAGN GPGPEKGRES EQSFIQRNDS GGAGLSPIPV SPVMDLSSNI 180 TLQGANISTP ITIHSNSSST DKDATPALDK IEKPAQSSLN TLGENSSGVD VPKENKKPEI 240 PTPAVITIAE MKNMLLQNRA SYRSMSPRLS SAVDQEMLYA RSQIENAPLL KNDHELYAPL 300 YRNVSRFKRS YELMEETLKV YVYKEGQRPI LHEPVLKGIY ASEGWFMKQL EANKQFVTKD 360 SRKAHLFYLP FSSRMLEETL YVQNSHNHKN LIQYLRNYVN LISAKHNFWN RTEGADHFLV 420 ACHDWAPAET RIIMANCIRA LCNSDVKQGF VFGKDVSLPE TNVLSPQNPL WAIGGKPASQ 480 RSILAFFAGS MHGYLRPILL HHWENKDPDM KIFGQMPKAK GRGKRKGKMD YIQHMKSSKY 540 CICAKGYEVH SPRVVEAIFY ECVPVIISDN FVPPFFEILN WESFAVFVLE KDIPNLKNIL 600 LSISEKRYRK MQMMVKKVQQ HFLWHPRPVK YDIFHMILHS IWYNRVFLAR AR* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-64 | 318 | 603 | 306 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20855.1 | 0 | 1 | 652 | 1 | 604 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197954.1 | 0 | 8 | 647 | 8 | 650 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0 | 1 | 652 | 1 | 669 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 183 | 652 | 4 | 471 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 251 | 652 | 1 | 398 | predicted protein [Populus trichocarpa] |