Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10007806m |
Family | CE8 |
Protein Properties | Length: 595 Molecular Weight: 65261.1 Isoelectric Point: 8.1019 |
Chromosome | Chromosome/Scaffold: 1 Start: 25001341 End: 25004726 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 283 | 578 | 0 |
DVTVAADGSGNYLTVAAAVAAAPEGSSRRYIIRIKAGEYRENVEVPKKKINLMFIGDGRTTTIITGSRNVVDGSTTFNSATVAVVGDGFLARDITFQNTA GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIG ATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIA |
Full Sequence |
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Protein Sequence Length: 595 Download |
MLHPCFNLIT RNQALSTKIF TTMAQPRKLF LALFAVVLVV TAVVTIIATR KNNSSNTNDE 60 HIAAHAHAYA QPVIRSSCSA TLYPELCFSA LSAAPAAAVS KVNSPKDVIR LSLNLTITAV 120 QHNYFAIKKL ITTRKSTLTK REKTSLHDCL EMVDETLDEL YKTEHELQGY PAAANNKSIA 180 EQADELKILV SAAMTNQETC LDGFSHERAD KKIREELMEG QMHVFHMCSN ALAMIKNMTD 240 GDIGKDIVDH YSKARRLDDE TKWPEWLSAG DRRLLQATTV VPDVTVAADG SGNYLTVAAA 300 VAAAPEGSSR RYIIRIKAGE YRENVEVPKK KINLMFIGDG RTTTIITGSR NVVDGSTTFN 360 SATVAVVGDG FLARDITFQN TAGPSKHQAV ALRVGSDLSA FYRCDMLAYQ DTLYVHSLRQ 420 FYTSCIIAGT VDFIFGNAAA VFQNCDIHAR RPNPNQRNMV TAQGRDDPNQ NTGIVIQKCR 480 IGATSDLLAV KGSFETYLGR PWKRYSRTVV MQSDISDVIN PAGWYEWSGN FALDTLFYAE 540 YQNTGAGADT SNRVKWSTFK VITSAAEAQT YTAANFIAGS TWLGSTGFPF SLGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 2.0e-153 | 141 | 594 | 454 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 2.0e-156 | 74 | 594 | 524 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 1.0e-163 | 115 | 594 | 483 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 54 | 594 | 553 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 290 | 580 | 291 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK84485.1 | 0 | 1 | 594 | 38 | 631 | putative thermostable pectinesterase [Citrus sinensis] |
Swiss-Prot | P83948 | 0 | 50 | 594 | 54 | 584 | PME3_CITSI RecName: Full=Pectinesterase 3; Short=PE 3; AltName: Full=Pectin methylesterase 3; Flags: Precursor |
RefSeq | XP_002265171.1 | 0 | 55 | 594 | 83 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273402.1 | 0 | 61 | 594 | 45 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324773.1 | 0 | 49 | 594 | 38 | 573 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 276 | 594 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 280 | 594 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-23 | 277 | 551 | 1 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-23 | 277 | 551 | 1 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-23 | 277 | 551 | 1 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |