Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10007819m |
Family | CE8 |
Protein Properties | Length: 590 Molecular Weight: 65260.2 Isoelectric Point: 8.2854 |
Chromosome | Chromosome/Scaffold: 1 Start: 24960580 End: 24962726 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 279 | 573 | 0 |
LIVAKDGSGNFTTISEALAAVPQKYEGRFVIYVAAGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGINIYDTATFVAIGEGLFAKSMGFRNIAG PEKGEAVAARVQSDRATFHNCRFEGYQNAVWVQTHRQFYRSCLITGTVDFIFGDAAAIFQNCQIMVRKPLDGQENTVTAQSRIDKFQTTGIVLQNCEIAP DESLEPVKNSFRTYLGRPSKEYSRTIIMDSTLEDLIHPEGWLALKGNYGLKTLYYAEFNNKGPGASTKGRVKWPGYKTIVKEEAIKYTVRPFLQG |
Full Sequence |
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Protein Sequence Length: 590 Download |
MVFQDFDHLS ERRKAERQRK FRKRVTISAI SAFVLIILIA AGVFGVVSQD NGEDSSKTSP 60 SSGAPKGISR AQKMISTICG STAYKNSCND TLSAAAEKDP SIDEPREFLK ASIAATVVEL 120 DKAIKKVESN DFNAPETEAA FKVCKKVIDD AKEELNRCVS QVGGKKRDLG MLVERAGELN 180 NWLSAVMTYQ QTCIDGFPEG KMKSDMDKTL NETQQLTSNS LAMISQFSKY LSSIMNLTPE 240 GTDHRGLLDS KDGVLPSWMS HQERKMLQNE ENNKIEPHLI VAKDGSGNFT TISEALAAVP 300 QKYEGRFVIY VAAGIYEESV TVSKRMVNLT IIGEGSQKSI IVGRKSVADG INIYDTATFV 360 AIGEGLFAKS MGFRNIAGPE KGEAVAARVQ SDRATFHNCR FEGYQNAVWV QTHRQFYRSC 420 LITGTVDFIF GDAAAIFQNC QIMVRKPLDG QENTVTAQSR IDKFQTTGIV LQNCEIAPDE 480 SLEPVKNSFR TYLGRPSKEY SRTIIMDSTL EDLIHPEGWL ALKGNYGLKT LYYAEFNNKG 540 PGASTKGRVK WPGYKTIVKE EAIKYTVRPF LQGDYWINKT GAPVHFGLF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 7.0e-153 | 18 | 583 | 583 | + pectinesterase | ||
PLN02990 | PLN02990 | 8.0e-155 | 20 | 583 | 575 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 9.0e-171 | 11 | 588 | 584 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 4.0e-175 | 278 | 574 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 1 | 589 | 604 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA89480.1 | 0 | 1 | 588 | 1 | 596 | pectin methylesterase [Salix gilgiana] |
RefSeq | XP_002273499.1 | 0 | 1 | 589 | 1 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324181.1 | 0 | 1 | 589 | 1 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326319.1 | 0 | 1 | 588 | 1 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516193.1 | 0 | 1 | 589 | 1 | 593 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 271 | 588 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 275 | 589 | 1 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-17 | 289 | 524 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-17 | 289 | 524 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-17 | 289 | 524 | 18 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |