| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10007838m |
| Family | GH35 |
| Protein Properties | Length: 582 Molecular Weight: 64327 Isoelectric Point: 7.9106 |
| Chromosome | Chromosome/Scaffold: 1 Start: 9428841 End: 9434694 |
| Description | beta-galactosidase 12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 4 | 192 | 0 |
| WAAMHKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFGPVEWDIGAPGKAYAKWAAQMAVGLNTGVPWVMCKQDDAPDPVINTCNGFYCEKFVPNQNYKP KMWTEAWTGWFTEFGSAVPTRPAEDLVFSVARFIQSGGSFINYYMYHGGTNFGRTSGGFVATSYDYDAPIDEYGLLNEPKWGHLRDLHK | |||
| Full Sequence |
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| Protein Sequence Length: 582 Download |
| MELWAAMHKF TEKIVSMMKA EKLFQTQGGP IILSQIENEF GPVEWDIGAP GKAYAKWAAQ 60 MAVGLNTGVP WVMCKQDDAP DPVINTCNGF YCEKFVPNQN YKPKMWTEAW TGWFTEFGSA 120 VPTRPAEDLV FSVARFIQSG GSFINYYMYH GGTNFGRTSG GFVATSYDYD APIDEYGLLN 180 EPKWGHLRDL HKAIKLCEPA LVSVDPTVKS LGKNQEAHVF NSKSGKCAAF LANYDTTFSA 240 KVSFGNAQYD LPPWSISVLP DCKTAVFNTA RVGVQSSQKK FVPVINAFSW QSYIEETASS 300 TDDNTFTKDG LWEQVYLTAD ASDYLWYMTD VNIDSNEGFL KNGQDPLLTI WSAGHALQVF 360 INGQLSGTVY GSLENPKLTF SKNVKLRPGV NKISLLSTSV GLPNVGTHFE KWNAGVLGPV 420 TLKGLNEGTR DISKQKWTYK IGLKGEALSL HTISGSSSVE WAQGASLAQK QPMTWYKTTF 480 NVPPGNDPLA LDMGAMGKGM VWINGQSIGR HWPGYIGNGN CGGCNYAGTY TEKKCRTYCG 540 KPSQRWYHVP RSWLKPSGNL LVVFEEWGGE PHWISLLKRT T* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-79 | 5 | 194 | 206 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 5 | 581 | 578 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK31801.1 | 0 | 5 | 581 | 161 | 737 | beta-galactosidase [Citrus sinensis] |
| GenBank | ABV32546.1 | 0 | 5 | 581 | 150 | 726 | beta-galactosidase protein 1 [Prunus persica] |
| GenBank | ABY71826.1 | 0 | 5 | 581 | 150 | 726 | beta-galactosidase [Prunus salicina] |
| RefSeq | XP_002308268.1 | 0 | 5 | 581 | 150 | 726 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514108.1 | 0 | 5 | 581 | 152 | 728 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000000004 | 26 | 190 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.00009 | 344 | 568 | 396 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000002 | 28 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000001 | 324 | 581 | 385 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000002 | 28 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO780602 | 585 | 5 | 580 | 0 |
| HO795552 | 490 | 5 | 493 | 0 |
| HO778160 | 579 | 5 | 580 | 0 |
| CO117566 | 302 | 37 | 337 | 0 |
| HO784793 | 322 | 19 | 337 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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