Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10007975m |
Family | GT8 |
Protein Properties | Length: 534 Molecular Weight: 60589.3 Isoelectric Point: 9.6268 |
Chromosome | Chromosome/Scaffold: 1 Start: 20553923 End: 20558851 |
Description | galacturonosyltransferase 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 173 | 505 | 0 |
CLALRLANEHSTNAAARLQLPSAELVPALVDNSYFHYVLASDNVLATSVVATSLVKNSLHPAKIVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALQHF DWFSKGKVPVLEAMEKDQRVRAQFRGGSSAIVANNTEKPYVIAAKLQALSPKYNSLMNHIRIHLPEMFPSLNKVVFLDDDLVVQTDLSPLWDIDMNGKVN GAVATCRGDDKFVMSKTLKSYLNFSHPLISRNFDPNECAWAYGMNIFDLEAWRKTNISQTYHYWLEQNLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWH MLGLGYQENTSFADAESAGVIHFNGRAKPWLDI |
Full Sequence |
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Protein Sequence Length: 534 Download |
MQLHISPSLR HVTVLPGKGV REFIKVKVGS RRLSYRMLFY SLLFLTFLLR FVFVLSAVDT 60 IDGESKCSTI GCLGKRLGPR ILGRRPQSTV PEVIYQILEE PMSKDELKGR SDIPQTLEEF 120 MADMKESKSD AKTFAIKLRD MVTLMEQRTR TAKIQEYLYR HVASSSIPKQ LHCLALRLAN 180 EHSTNAAARL QLPSAELVPA LVDNSYFHYV LASDNVLATS VVATSLVKNS LHPAKIVLHI 240 ITDRKTYYPM QAWFSLHPLS PAIIEVKALQ HFDWFSKGKV PVLEAMEKDQ RVRAQFRGGS 300 SAIVANNTEK PYVIAAKLQA LSPKYNSLMN HIRIHLPEMF PSLNKVVFLD DDLVVQTDLS 360 PLWDIDMNGK VNGAVATCRG DDKFVMSKTL KSYLNFSHPL ISRNFDPNEC AWAYGMNIFD 420 LEAWRKTNIS QTYHYWLEQN LKSDLSLWQL GTLPPGLIAF HGHVHVIDPF WHMLGLGYQE 480 NTSFADAESA GVIHFNGRAK PWLDIAFPKL RPLWSKYINF SDKFIKSCHI RAS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02829 | PLN02829 | 4.0e-134 | 103 | 530 | 435 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 2.0e-136 | 125 | 531 | 407 | + Probable galacturonosyltransferase | ||
PLN02867 | PLN02867 | 9.0e-163 | 1 | 530 | 540 | + Probable galacturonosyltransferase | ||
PLN02659 | PLN02659 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase | ||
PLN02870 | PLN02870 | 0 | 1 | 533 | 534 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABP65660.1 | 0 | 1 | 533 | 1 | 533 | secondary wall-associated glycosyltransferase family 8D [Populus tremula x Populus alba] |
EMBL | CAN78125.1 | 0 | 1 | 533 | 1 | 553 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20502.1 | 0 | 1 | 533 | 1 | 533 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282637.1 | 0 | 1 | 533 | 1 | 534 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319802.1 | 0 | 1 | 533 | 1 | 533 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00004 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.0001 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.0001 | 321 | 502 | 74 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |