Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10008012m |
Family | GH1 |
Protein Properties | Length: 520 Molecular Weight: 58351.8 Isoelectric Point: 7.8232 |
Chromosome | Chromosome/Scaffold: 1 Start: 20102612 End: 20107488 |
Description | beta glucosidase 41 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 124 | 514 | 0 |
RADFPDGFIFGTASSAYQFEGAVNEGNKGPSIWDSFTRQPGRIMDFSNADTAVDQYHRFKVKTQSLQSDIDLMKDLGMDAYRFSISWPRIFPNGTGEPNP EGISYYNSLIDALLEKGIQPCVTLYHWDLPQVLEDKYGGWLSRQIIEDFEHYAFTCFQEFGDRVKYWITFNEPHGFTLQGYDTGLQAPGRCSILGHLFCK TGKSSIEPYVVAHNILLSHAAAYHSYRINFKEKQGGQIGIALDAKWYEPKSDSDEDKDAAQRAIDFGIGWFLDPLFFGEYPLSMRSLVDGRLPEITPEMS KALVGSLDFVGLNHYTTLYARNDRSRIQKLILQDAYSDAAVITTSFRSGIAIGKRAASRWLHIVPWGIRKLARYVKHKYKNPPMIITENGR |
Full Sequence |
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Protein Sequence Length: 520 Download |
MNRAYYVLFR VPCFDPSLIV PCFKARVPKI LGPAQPTCVP CRASCLTETC SCRAVPVPYH 60 VPPGPLTIFS RDVNINKISR MDTCLITPEK IRAFSCNELS SMAITLISIL LITNLVANSE 120 SISRADFPDG FIFGTASSAY QFEGAVNEGN KGPSIWDSFT RQPGRIMDFS NADTAVDQYH 180 RFKVKTQSLQ SDIDLMKDLG MDAYRFSISW PRIFPNGTGE PNPEGISYYN SLIDALLEKG 240 IQPCVTLYHW DLPQVLEDKY GGWLSRQIIE DFEHYAFTCF QEFGDRVKYW ITFNEPHGFT 300 LQGYDTGLQA PGRCSILGHL FCKTGKSSIE PYVVAHNILL SHAAAYHSYR INFKEKQGGQ 360 IGIALDAKWY EPKSDSDEDK DAAQRAIDFG IGWFLDPLFF GEYPLSMRSL VDGRLPEITP 420 EMSKALVGSL DFVGLNHYTT LYARNDRSRI QKLILQDAYS DAAVITTSFR SGIAIGKRAA 480 SRWLHIVPWG IRKLARYVKH KYKNPPMIIT ENGRSVVSG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 9.0e-119 | 127 | 517 | 398 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02814 | PLN02814 | 4.0e-121 | 119 | 519 | 402 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 3.0e-123 | 119 | 516 | 398 | + beta-glucosidase | ||
TIGR03356 | BGL | 3.0e-129 | 128 | 513 | 386 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-152 | 127 | 513 | 390 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20471.1 | 0 | 101 | 513 | 76 | 480 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200268.3 | 0 | 118 | 513 | 26 | 415 | BGLU41 (BETA GLUCOSIDASE 41); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002280323.1 | 0 | 102 | 513 | 1 | 404 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319794.1 | 0 | 115 | 506 | 25 | 409 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530914.1 | 0 | 102 | 513 | 1 | 399 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 122 | 513 | 12 | 396 | A Chain A, Structure Of The Gentamicin-Aph(2")-Iia Complex |
PDB | 3gnp_A | 0 | 122 | 513 | 12 | 396 | A Chain A, Structure Of The Gentamicin-Aph(2")-Iia Complex |
PDB | 3gno_A | 0 | 122 | 513 | 12 | 396 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 122 | 513 | 15 | 393 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 122 | 513 | 15 | 393 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY960855 | 305 | 113 | 417 | 0 |
GO843301 | 309 | 113 | 421 | 0 |
EL454504 | 284 | 115 | 398 | 0 |
CK277037 | 283 | 115 | 395 | 0 |
EL435532 | 288 | 119 | 401 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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