| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10008306m |
| Family | GT43 |
| Protein Properties | Length: 444 Molecular Weight: 50387.4 Isoelectric Point: 7.3586 |
| Chromosome | Chromosome/Scaffold: 1 Start: 2997513 End: 3001226 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT43 | 208 | 414 | 0 |
| LAHTLRMVQPPLLWIVVEMTSQSEETADVLRRTGVMYRHLVCKKNLTDVKDTRVHQRNVALSHIENHHLDGIVYFADENNIYLTDLFEELRQIRRFGTWT VAKLSENKMDTILEGPICNGTRVIGWHVNEPRERFRRFHAEMSGFAFNSTILWDPKRWHRPTLEPIRQVDTVKDGFQASTFVEQIVEDESQMEGLLEECS RIMAWLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 444 Download |
| MASIRRTMSP VPRAGTLLNG EACQVASPLS KSSSCTQNHP ASSGGLLSYL HSSLDSQALI 60 FGVSSPRSSR PLERARPKAQ VWRRALFHFL ICFVVGVFIG LTPFVSMNLS TNLMSKQQAL 120 TFEMVYAFGN SQTYDGMARN VTVDNDGIKN NATLESQAEI RELRDVLSDD YSANQSLPQD 180 SDLVSRKLII IVTPTDAQPF QAYYLNRLAH TLRMVQPPLL WIVVEMTSQS EETADVLRRT 240 GVMYRHLVCK KNLTDVKDTR VHQRNVALSH IENHHLDGIV YFADENNIYL TDLFEELRQI 300 RRFGTWTVAK LSENKMDTIL EGPICNGTRV IGWHVNEPRE RFRRFHAEMS GFAFNSTILW 360 DPKRWHRPTL EPIRQVDTVK DGFQASTFVE QIVEDESQME GLLEECSRIM AWLLPLESSN 420 AFYPQKWFLK NNLDVMAPLA RSS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03360 | Glyco_transf_43 | 2.0e-64 | 208 | 412 | 214 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 7.0e-94 | 187 | 417 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| PLN02458 | PLN02458 | 5.0e-96 | 72 | 419 | 358 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18893.1 | 0 | 1 | 439 | 1 | 430 | unknown [Glycine max] |
| EMBL | CAN81600.1 | 0 | 180 | 440 | 5 | 265 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20871.1 | 0 | 1 | 440 | 1 | 448 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002309550.1 | 0 | 1 | 440 | 1 | 442 | glycosyl transferase [Populus trichocarpa] |
| RefSeq | XP_002516557.1 | 0 | 1 | 440 | 1 | 438 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v84_B | 3e-23 | 189 | 412 | 5 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v84_A | 3e-23 | 189 | 412 | 5 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_B | 3e-23 | 189 | 412 | 5 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v83_A | 3e-23 | 189 | 412 | 5 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
| PDB | 1v82_B | 3e-23 | 189 | 412 | 5 | 229 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
