Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10008555m |
Family | GH17 |
Protein Properties | Length: 394 Molecular Weight: 43701.1 Isoelectric Point: 8.5342 |
Chromosome | Chromosome/Scaffold: 1 Start: 4308475 End: 4312291 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 37 | 355 | 0 |
GINYGRIADNIPSPDEVAVLLRASKIKNVRIYDADHSVLKAFSGTGLELVVGLPNGLVKEMSANESHAMDWVKENVQNFLPKTKICGIAVGNEVLGGADS ELWGALLGAVKNVYNSIKKLHLDDVVQITTAHSQAVFANSYPPSSCIFKEGVDQFMKPLLDFFSQIGSPFCLNVYPFLAYMSDPENIDINYALFQSTQGI DDSKTKLHYDNMLDAQIDAAYAALEDAGFKKMEVIVTETGWASRGDSNEAAATVDNARTYNYNLRKRLAKKKGTPLRPKNVVKAYVFAIFNENQKPGPTS ERNFGLFKPDGSIAYDIGF |
Full Sequence |
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Protein Sequence Length: 394 Download |
MKKSLRFFLR FHLLLFFSVF FTLIDPKKVQ AFTGTYGINY GRIADNIPSP DEVAVLLRAS 60 KIKNVRIYDA DHSVLKAFSG TGLELVVGLP NGLVKEMSAN ESHAMDWVKE NVQNFLPKTK 120 ICGIAVGNEV LGGADSELWG ALLGAVKNVY NSIKKLHLDD VVQITTAHSQ AVFANSYPPS 180 SCIFKEGVDQ FMKPLLDFFS QIGSPFCLNV YPFLAYMSDP ENIDINYALF QSTQGIDDSK 240 TKLHYDNMLD AQIDAAYAAL EDAGFKKMEV IVTETGWASR GDSNEAAATV DNARTYNYNL 300 RKRLAKKKGT PLRPKNVVKA YVFAIFNENQ KPGPTSERNF GLFKPDGSIA YDIGFHGLKS 360 SSAGSSHLSF KDIRARDCSL ILIILLWQWL FLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0007 | 34 | 346 | 329 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-102 | 37 | 353 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67102.1 | 0 | 31 | 374 | 28 | 371 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAY25165.1 | 0 | 30 | 371 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | XP_002282272.1 | 0 | 3 | 386 | 2 | 392 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 30 | 363 | 3 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 9 | 357 | 3 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 37 | 355 | 3 | 315 | A Chain A, Y370g Active Site Mutant Of The Sialidase From Micromonospora Viridifaciens In Complex With Beta-Neu5ac (Sialic Acid) |
PDB | 3f55_C | 0 | 37 | 355 | 3 | 315 | A Chain A, Y370g Active Site Mutant Of The Sialidase From Micromonospora Viridifaciens In Complex With Beta-Neu5ac (Sialic Acid) |
PDB | 3f55_B | 0 | 37 | 355 | 3 | 315 | A Chain A, Y370g Active Site Mutant Of The Sialidase From Micromonospora Viridifaciens In Complex With Beta-Neu5ac (Sialic Acid) |
PDB | 3f55_A | 0 | 37 | 355 | 3 | 315 | A Chain A, Y370g Active Site Mutant Of The Sialidase From Micromonospora Viridifaciens In Complex With Beta-Neu5ac (Sialic Acid) |
PDB | 3em5_D | 0 | 37 | 355 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |