| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10008973m |
| Family | GT8 |
| Protein Properties | Length: 314 Molecular Weight: 35746.4 Isoelectric Point: 9.6133 |
| Chromosome | Chromosome/Scaffold: 1 Start: 20553923 End: 20558851 |
| Description | galacturonosyltransferase 12 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 29 | 295 | 1.26117e-44 |
| CLALRLANEHSTNAAARLQLPSAELVPALVDNSYFHYVLASDNVLATSVVATSLVKNSLHPAKIVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALQHF DWFSKGKVPVLEAMEKDQRVRAQFRGGSSAIVANNTEKPYVIAAKLQALSPKYNSLMNHIRIHLPEMFPSLNKVVFLDDDLVVQTDLSPLWDIDMNGKVN GAVATCRGDDKFVMSKTLKSYLNFSHPLISRNFDPNECAWAYGMNIFDLEAWRKTNISQTYHYWLEQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 314 Download |
| MEQRTRTAKI QEYLYRHVAS SSIPKQLHCL ALRLANEHST NAAARLQLPS AELVPALVDN 60 SYFHYVLASD NVLATSVVAT SLVKNSLHPA KIVLHIITDR KTYYPMQAWF SLHPLSPAII 120 EVKALQHFDW FSKGKVPVLE AMEKDQRVRA QFRGGSSAIV ANNTEKPYVI AAKLQALSPK 180 YNSLMNHIRI HLPEMFPSLN KVVFLDDDLV VQTDLSPLWD IDMNGKVNGA VATCRGDDKF 240 VMSKTLKSYL NFSHPLISRN FDPNECAWAY GMNIFDLEAW RKTNISQTYH YWLEQVITII 300 HRFKLKEKKN ILI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02829 | PLN02829 | 2.0e-89 | 2 | 292 | 291 | + Probable galacturonosyltransferase |
| PLN02742 | PLN02742 | 2.0e-93 | 1 | 295 | 295 | + Probable galacturonosyltransferase |
| PLN02867 | PLN02867 | 8.0e-108 | 1 | 294 | 294 | + Probable galacturonosyltransferase |
| PLN02870 | PLN02870 | 2.0e-146 | 1 | 295 | 295 | + Probable galacturonosyltransferase |
| PLN02659 | PLN02659 | 0 | 1 | 295 | 295 | + Probable galacturonosyltransferase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78125.1 | 0 | 1 | 295 | 165 | 459 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI20502.1 | 0 | 1 | 295 | 145 | 439 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282637.1 | 0 | 1 | 295 | 146 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319802.1 | 0 | 1 | 295 | 145 | 439 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
| RefSeq | XP_002522830.1 | 0 | 1 | 295 | 145 | 439 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ss9_A | 0.00005 | 148 | 301 | 48 | 185 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1ga8_A | 0.00008 | 148 | 301 | 48 | 185 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 1g9r_A | 0.00008 | 148 | 301 | 48 | 185 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DW161142 | 293 | 1 | 293 | 0 |
| FS586071 | 246 | 32 | 277 | 0 |
| GE470390 | 238 | 58 | 295 | 0 |
| GE470387 | 240 | 56 | 295 | 0 |
| CA917455 | 242 | 5 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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