Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10010454m |
Family | GH35 |
Protein Properties | Length: 835 Molecular Weight: 93295.4 Isoelectric Point: 6.7008 |
Chromosome | Chromosome/Scaffold: 1 Start: 24642845 End: 24646674 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 340 | 0 |
TIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWIMCQESDAPSPMINTCNG FYCDQFTPNNPNSPKIWTENWTGWFKSWGGKDPKRTAEDLAFAVARFFQFGGTVQNYYMYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLR ELHK |
Full Sequence |
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Protein Sequence Length: 835 Download |
MATLKHCSRA ILLCLILQTL FNLSLAYRVS HDGRAITIDG ERKILLSGSI HYPRSTPGMW 60 PDLIKKAKEG GLDAIETYVF WNAHEPLRRQ YDFTGNLDLI RFIKTIQDQG LYVILRIGPY 120 VCAEWNYGGF PVWLHNMPGI EELRTTNKVF MNEMQNFTTL IVDMAKKEKL FASQGGPIIL 180 AQIENEYGNV MSDYGDAGKS YINWCAKMAT SLDIGVPWIM CQESDAPSPM INTCNGFYCD 240 QFTPNNPNSP KIWTENWTGW FKSWGGKDPK RTAEDLAFAV ARFFQFGGTV QNYYMYHGGT 300 NFGRTSGGPY LTTSYDYDAP IDEYGHLNQP KWGHLRELHK LLKSMEKTLT HGNVTNTDYG 360 NSVSATVYAT EEGSSCFLAN ENQSEDSTIT FQGSSYNLPA WSVSILPDCK TEEFNTAKVN 420 TQTNVKVKRP NQAGNDQAPL QWKWRPEMIN DFVVRGKGHF ALNTLIDQKS TNDVSDYLWY 480 MTNADLKDDD PILSGSSNMT LRINSSGQVL HAYVNGNYVD SQWTKYGASN DLFERPVKLT 540 RGKNQISLLS ATVGLQNYGS KFDMVPNGIP GPVLLVGRVG DETIIKDLSS HKWTYKVGLY 600 GLDDKKFYNA KAANSERGWS SKNVPLNRRM TWYKTTFEVP LENDPVVLNL QGMGKGFAWV 660 NGYNLGRYWP TYLAEEDGCS TESCDYRGPY GSDKCAYNCG NPSQIWYHVP RSWLKDGVNT 720 LVLFEEFGGN PSQINFQTVV VGTACGQAHE NKTMELTCHG RRISEIKYAS FGDPQGACGA 780 FKKGSCEAEI DVLPLIEKQC VGKKSCSVEA SEANLGATSC VTGTVKRLVV EALC* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-6 | 51 | 207 | 172 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-13 | 756 | 834 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 6.0e-29 | 29 | 332 | 362 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-163 | 35 | 342 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 11 | 834 | 850 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 10 | 834 | 5 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 1 | 834 | 12 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 6 | 834 | 2 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 834 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 10 | 834 | 33 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 38 | 338 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-39 | 27 | 338 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-39 | 27 | 338 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |