Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10010541m |
Family | GH35 |
Protein Properties | Length: 833 Molecular Weight: 92740.7 Isoelectric Point: 7.2136 |
Chromosome | Chromosome/Scaffold: 1 Start: 24648011 End: 24652238 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 335 | 0 |
IIDGKRKVIIAGSIHYPRSTPEMWPDLIRKAKEGGVDAIETYIFWDVHEPQRRKYDFSGNLDFVKFFKLVQDAGLYAIIRIGPYVCAEWNYGGFPMWLHN TPGIQLRTNNDIFKNEMQVFTTKIVNMCKEANLFASQGGPIILAQIENEYGNIMEKYGDAGKKYIKWCANMAVAQNISEPWIMCQQNDAPEPMINTCNGF YCDQFKPNNPKSPKMWTENWTGWFKLWGGRDPQRTAEDLAFSVARFFQSGGVLNNYYMYHGGTNFGRTAGGPYIATSYDYNAPLDEYGNLNQPKWGHLKQ LHE |
Full Sequence |
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Protein Sequence Length: 833 Download |
MASSGTQFVL VASLALLCSC LAIKVEYDAN AIIIDGKRKV IIAGSIHYPR STPEMWPDLI 60 RKAKEGGVDA IETYIFWDVH EPQRRKYDFS GNLDFVKFFK LVQDAGLYAI IRIGPYVCAE 120 WNYGGFPMWL HNTPGIQLRT NNDIFKNEMQ VFTTKIVNMC KEANLFASQG GPIILAQIEN 180 EYGNIMEKYG DAGKKYIKWC ANMAVAQNIS EPWIMCQQND APEPMINTCN GFYCDQFKPN 240 NPKSPKMWTE NWTGWFKLWG GRDPQRTAED LAFSVARFFQ SGGVLNNYYM YHGGTNFGRT 300 AGGPYIATSY DYNAPLDEYG NLNQPKWGHL KQLHEAIKEA EKFFTGGIVE TKNISTYVNL 360 TQFTVNATGE RFCMLSNGDN TGDYTADLGP DGKFFVPAWS VTFLQGCTEE VYNTAKINTQ 420 RSVMVNKHSH ENEKPAKLTW AWTPEPIQDT LDGNGKFKAA RLLDQKEASG DGSDYLWYMT 480 RVDTKDMSLE NATLRVSTKG HGLHAYVNGQ LIGTQFSRQA TGQQMVTGDD YSFGFDKAVS 540 SLKKGVNVIS LLSVTVGLTN YGAFYDLHPT GLVEGSVLLR EKGKDMIDAT GYEWSYKVGL 600 NGEAQHFYDP NSKNVNWSCT DVPKDRPMTW YKTSFKTPPG KEAVVVDLLG MGKGHAWVNG 660 RSIGRYWPTQ IAETSGCDPH CNYRGTYKDD KCRTNCGNPS QRWYHVPRSF LNKNADNTLI 720 LFEEVGGAPW NVTFQVVTVG TVCANAHEGN KVELRCQGHR KISEIQFASF GDPLGTCGSF 780 SVGNHQADQT VSVVEKLCLG KPSCSIEVSQ STFGHSSLGN LTSRLAVQAV CK* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-8 | 47 | 202 | 171 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 8.0e-13 | 754 | 831 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-24 | 25 | 327 | 358 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-159 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 831 | 840 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 9 | 831 | 10 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 9 | 831 | 26 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002297749.1 | 0 | 9 | 831 | 6 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324727.1 | 0 | 55 | 797 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 1 | 831 | 1 | 823 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 26 | 333 | 9 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-40 | 23 | 375 | 9 | 369 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-40 | 23 | 375 | 9 | 369 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |