| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10010665m |
| Family | CE8 |
| Protein Properties | Length: 206 Molecular Weight: 22825.1 Isoelectric Point: 9.461 |
| Chromosome | Chromosome/Scaffold: 1 Start: 24975185 End: 24976862 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 35 | 195 | 0 |
| YNTISEALAAVPQKYEGRFVIFVATGIYEESVTVSKRMVNLTIIGEGSQKSIIVGRKSVADGVNIYDAATFVAIGEGLFAKSMGFRNIAGPENGEAVAAR VQSDRATFHNCRFEGYKNAVWAQTHRQFYRSCLITGTVDFIFGDAATIFQNCQIMVRKPLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 206 Download |
| MVMEKKMSNR FGSSFRADTT RTTLDSGKRW LRKLYNTISE ALAAVPQKYE GRFVIFVATG 60 IYEESVTVSK RMVNLTIIGE GSQKSIIVGR KSVADGVNIY DAATFVAIGE GLFAKSMGFR 120 NIAGPENGEA VAARVQSDRA TFHNCRFEGY KNAVWAQTHR QFYRSCLITG TVDFIFGDAA 180 TIFQNCQIMV RKPLDVCNDS CIQNQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02468 | PLN02468 | 2.0e-54 | 16 | 194 | 179 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02217 | PLN02217 | 2.0e-56 | 35 | 201 | 167 | + probable pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 2.0e-57 | 35 | 194 | 160 | + pectinesterase |
| pfam01095 | Pectinesterase | 4.0e-82 | 35 | 195 | 161 | + Pectinesterase. |
| PLN02745 | PLN02745 | 3.0e-88 | 35 | 195 | 161 | + Putative pectinesterase/pectinesterase inhibitor |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA89480.1 | 0 | 35 | 195 | 298 | 458 | pectin methylesterase [Salix gilgiana] |
| RefSeq | XP_002273499.1 | 0 | 35 | 195 | 294 | 454 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324181.1 | 0 | 35 | 195 | 294 | 454 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326319.1 | 0 | 35 | 195 | 297 | 459 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516193.1 | 0 | 35 | 195 | 294 | 454 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 1.96182e-44 | 35 | 193 | 15 | 173 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1.99993e-41 | 35 | 193 | 19 | 177 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.000000000000006 | 33 | 196 | 16 | 198 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.000000000000006 | 33 | 196 | 16 | 198 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.000000000000006 | 33 | 196 | 16 | 198 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CF208165 | 161 | 35 | 195 | 0 |
| EX166350 | 161 | 35 | 195 | 0 |
| GR461604 | 160 | 35 | 194 | 0 |
| DY918231 | 145 | 51 | 195 | 0 |
| AM787280 | 157 | 39 | 195 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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