Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10010771m |
Family | GH35 |
Protein Properties | Length: 833 Molecular Weight: 92659.5 Isoelectric Point: 7.3785 |
Chromosome | Chromosome/Scaffold: 1 Start: 24654486 End: 24658616 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 32 | 335 | 0 |
LIIDGQRKVIISGSIHYPRSTPEMWPDLIQKAKDGGLDAIETYIFWNVHEPRRREYDFSGNLDFVKFFKLVQDAGLYAILRIGPYVCAEWNYGGFPMWLH NTPGIQLRTDNDIFKNEMQVFTTKIVNMCKEANLFASQGGPIILAQIENEYGNIMEKYGDAGKQYIKWCANMAVAQNISEPWIMCQQSDAPEPMINTCNG FYCDQFKPNNPKSPKMWTENWTGWFKLWGGRDPQRTAEDLAFSVARFFQNGGVLNNYYMYHGGTNFGRTAGGPYIATSYDYNAPLDEYGNLNQPKWGHLK QLHA |
Full Sequence |
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Protein Sequence Length: 833 Download |
MASSRTEFVL VAGLAMLCSC LAIKVEYDAN ALIIDGQRKV IISGSIHYPR STPEMWPDLI 60 QKAKDGGLDA IETYIFWNVH EPRRREYDFS GNLDFVKFFK LVQDAGLYAI LRIGPYVCAE 120 WNYGGFPMWL HNTPGIQLRT DNDIFKNEMQ VFTTKIVNMC KEANLFASQG GPIILAQIEN 180 EYGNIMEKYG DAGKQYIKWC ANMAVAQNIS EPWIMCQQSD APEPMINTCN GFYCDQFKPN 240 NPKSPKMWTE NWTGWFKLWG GRDPQRTAED LAFSVARFFQ NGGVLNNYYM YHGGTNFGRT 300 AGGPYIATSY DYNAPLDEYG NLNQPKWGHL KQLHASIKQA EKFLTNGTVE TKSVMNFVDL 360 TKFTLNATGE RFCMLSNSDN TGDYTADLGE DGKFFVPAWS VTFLQNCSKE VYNTAKINTQ 420 TSVMVTKHSE EDAYGNEVKP AKLSWMWAPE PIQDTLKGNG RFEAAQLLDQ KEASGDVSDY 480 LWYMTRNISL KNMTLRVSTN GHGLHAYVNG KLIGSQFSRQ AKGQQMVTGD DYSFGFDKAV 540 SLKKGLNVIS LLSVTVGLAN YGAFYDLKPT GLINGGVLLN GKGNNSINAT TYQWSYKVGL 600 NGEAQQFHDP NSRNANWNST KVPKNRPMTW YKTSFKTPSG EEPVVLGLLG MGKGHAWMNG 660 KSIGRYWPTQ IAETTGCDAH CNYKGSYNDG KCRTNCGNPS QRWYHVPRSF LNNNTDNTLI 720 LFEEVGGAPW NVTLQVVTVG TVCANAYEGN NLELYCQGDR RISEIQFASF GDPQGTCGSF 780 SLGNYQATQS VAVVEKLCAG RPSCLIDVSQ STFGISSWGN VTSRLAVQAV CK* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 5.0e-7 | 47 | 202 | 171 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-10 | 762 | 831 | 73 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-24 | 25 | 327 | 360 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-162 | 31 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 17 | 831 | 853 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 9 | 831 | 10 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 9 | 831 | 26 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 55 | 797 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 1 | 831 | 1 | 823 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 1 | 831 | 1 | 825 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 26 | 333 | 9 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_B | 9.99967e-42 | 34 | 321 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8d_A | 9.99967e-42 | 34 | 321 | 12 | 314 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4e8c_B | 9.99967e-42 | 34 | 321 | 12 | 314 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |