| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011029m |
| Family | AA3 |
| Protein Properties | Length: 899 Molecular Weight: 101064 Isoelectric Point: 9.0402 |
| Chromosome | Chromosome/Scaffold: 6 Start: 20309805 End: 20313653 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 176 | 451 | 2.6e-25 |
| KLGGILFLSRYRSTSVHLLGGCNASSDPSQGVCNSVGQVFDPKAAAGVHPGLYVCDGSLIPCSVGVNPCLTIAAVAEHVSRHLVKDVIEYKNKKGIEDVA KTVDKNLKSNQRSMVVIKETMKGYIGGMPCTAYLKMKMNSQNLQGFDYTNSVMEDSHSLLRGKVGGCVVFTAIDKDTLHVIDGDVDLCQVDSRTPYTQYM RYRILLAASSGLRYILEGKKIMNPFLFALYAWRETTTLHVTFKNVSGNGLRDEVTNLTGELKISVIELLKSLMTLE | |||
| Full Sequence |
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| Protein Sequence Length: 899 Download |
| MRGLNLSDAL GCGFSCKWEY CRFSCRKPCS PKFLWISQKE NPRDTISTAT RASHLFILHF 60 FIGFHNPGLR FQCTHKSIYF SSHNAVLPTA YPYLLFKGIT TYGWPTGYWF FHGIIDKLKH 120 FAGFKSSQAM VLNAMGYDEG DGKIMFEKST NKICFSPPRD PLLPRKVEAF QKLTKKLGGI 180 LFLSRYRSTS VHLLGGCNAS SDPSQGVCNS VGQVFDPKAA AGVHPGLYVC DGSLIPCSVG 240 VNPCLTIAAV AEHVSRHLVK DVIEYKNKKG IEDVAKTVDK NLKSNQRSMV VIKETMKGYI 300 GGMPCTAYLK MKMNSQNLQG FDYTNSVMED SHSLLRGKVG GCVVFTAIDK DTLHVIDGDV 360 DLCQVDSRTP YTQYMRYRIL LAASSGLRYI LEGKKIMNPF LFALYAWRET TTLHVTFKNV 420 SGNGLRDEVT NLTGELKISV IELLKSLMTL EGNRRINFAC LLTQSVLRTY ILQIPRGGHN 480 DCNMPDSYHK HYPSSSVHEI KAEDGRIICC RQWKCGQTPR RLKGEKQLNP VLLLNGYSIE 540 SSWLPTEPND LVRTLLEEGH ETWLLQSRLH PLNPADNFTI EDIGRYDIPA AIGKILELHG 600 HNIKVHIVAH CAGGLAIHIA LMGGHISATH IASLSCTNSS MFFKLNALAT FKMWLPLVPV 660 SMAILGKNNI LPLLETSETS FRHHLLRCIA RFIPRYERCT CNECEVLSGV FGNVFWHQNI 720 SRTMHHWIYR ENTTRLPMAG FPHLRKICNS GFIVDSHGNN SYLIHPERMK LSTLYISGGR 780 SLLVTPETSF LGNKYMKMHQ PGFRHERVVV DGFGHSDLLI GEEADKKVFP HILSHIRLAE 840 QGKNGVISSG EKYSKESLAW EDDFYSASRG FGSSWYSQRI VVLLMLLWVV IMLISLFL* 900 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2303 | BetA | 4.0e-13 | 138 | 261 | 126 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 3.0e-13 | 182 | 253 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 82 | 868 | 314 | 1093 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 77 | 868 | 523 | 1329 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 362 | 882 | 1 | 524 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 1 | 873 | 284 | 1149 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002530345.1 | 0 | 1 | 867 | 231 | 1063 | hypothetical protein RCOM_0293450 [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cnj_A | 0.000001 | 142 | 262 | 379 | 499 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.000001 | 142 | 262 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.000001 | 142 | 262 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4v_A | 0.000001 | 142 | 262 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4u_A | 0.000001 | 142 | 262 | 381 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 875 | 897 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CF418642 | 220 | 584 | 803 | 0 |
| EY857615 | 211 | 669 | 879 | 0 |
| EY855802 | 211 | 669 | 879 | 0 |
| EY856492 | 211 | 669 | 879 | 0 |
| EY857135 | 199 | 669 | 867 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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