Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10011062m |
Family | GT4 |
Protein Properties | Length: 840 Molecular Weight: 95236.3 Isoelectric Point: 6.3114 |
Chromosome | Chromosome/Scaffold: 6 Start: 21404402 End: 21408079 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 571 | 738 | 0 |
DRKKPIIFSMARLDVVKNLTGLTECYGKNKRLRNLVNLVIVGAFFDPSKSKDREETAEIKKMHALMEKYQLKGQMRWIAAQSDRLRNGELYRCIADTKGA FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSDKIADFFEACKVDP |
Full Sequence |
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Protein Sequence Length: 840 Download |
MASASSLKRS DSIADNMPDA LKQSRYHMKR CFVRYIEKGK RIMKLHHLMD ELNEVIDDED 60 VRTQVLEGLL GYILCSTQEA VVMPPHVAFA IRPNPGFWEF VKVNSDDLSV EAITVTDFLK 120 FKELVFDEDW AKDENALEVD FGAYEFSLPQ LTLSSSIGNG ISFVSKFVTA KLSGRQDCAQ 180 PLVDYLLSLD HQGEKLMIND NLNTAEKLQM ALIVAEVSLS TLPKDTPYQK FELRFKEWGF 240 EKGWGHTAER VRETMRSLSE VLQAPDPLHI EKFLSSLPIL FNVVIFSPHG YFGQADVLGL 300 PDTGGQVVYI LDQVKALEEE LLLRIKQQGL YINPQIVVVT RLIPDARGTK CNQELEPIEG 360 TKHSNILRVP FKTDKGILHR WVSRFDVYPY LEGFAQDATT MILEFLGGKP DLIIGNYSDG 420 NLVASLMASK LGITQATIAH ALEKTKYEDS DVKWKELDPK YHFSCQFIAD TIAMNATDFI 480 IASTFQEIAG SKDRPGQYES HTAFTLPGLC RVVKGIDVLD PKFNIAAPGA DQSVYFPYTE 540 KQRRLTKFHP EIEELLYNKE DNNEHIGYLA DRKKPIIFSM ARLDVVKNLT GLTECYGKNK 600 RLRNLVNLVI VGAFFDPSKS KDREETAEIK KMHALMEKYQ LKGQMRWIAA QSDRLRNGEL 660 YRCIADTKGA FVQPALYEAF GLTVIEAMNC GLPTFATNQG GPAEIIVDGV SGFHIDPYNG 720 DESSDKIADF FEACKVDPTY WNKFSTEGLK RINECYTWKI YANKMLNMGC MYSFWKQLNK 780 GQKLAKQRYI EMFYNLLFKN LVKNVPVPNE EAQQPMSEPA VKPQHSLRQA RSSTNMLHF* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 2.0e-58 | 283 | 768 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 2.0e-117 | 282 | 766 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 815 | 815 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 25 | 806 | 783 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 9 | 558 | 550 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27338.1 | 0 | 1 | 835 | 1 | 842 | unnamed protein product [Vitis vinifera] |
EMBL | CBI35298.1 | 0 | 1 | 825 | 1 | 830 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002267020.1 | 0 | 1 | 825 | 1 | 825 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305240.1 | 0 | 5 | 801 | 2 | 788 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327452.1 | 0 | 5 | 828 | 2 | 815 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 1 | 813 | 1 | 810 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 3s29_G | 0 | 1 | 813 | 1 | 810 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 3s29_F | 0 | 1 | 813 | 1 | 810 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 3s29_E | 0 | 1 | 813 | 1 | 810 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
PDB | 3s29_D | 0 | 1 | 813 | 1 | 810 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 824 | 3 | 820 | 0 |
BU103683 | 810 | 2 | 810 | 0 |
CX109054 | 598 | 107 | 703 | 0 |
FG227316 | 454 | 280 | 732 | 0 |
HO410243 | 620 | 189 | 805 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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