| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011111m |
| Family | AA3 |
| Protein Properties | Length: 781 Molecular Weight: 85530.1 Isoelectric Point: 7.3954 |
| Chromosome | Chromosome/Scaffold: 6 Start: 24165666 End: 24169476 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA3 | 265 | 770 | 0 |
| PSLVIKCDAVVVGSGSGGGVIAGVLAKAGYKVLVLEKGSYCARSNLSLLEGKTMDQMYLAGGMLATDDMGVILLAGSTVGGGSTINWSASIKTPKHVANE WCDEYELKLFESDLYKEAMEVVCERIGVQSEVEDEGFNNAVLRRGCKELGYPVNNIPRNSPPDHYCGWCCLGCKDGSKKGTSETWLVDLVNSGNSAILPG CEAIEVLHKKRRDRNVATGVAFEFQYMGAKDICVVESKVTIVACGALSTPNLLKRSGLKNANIGKNLHLHPVTMAWGYFPKTSSSGEWPEEKKTSYEGGI MTAMSTTVGNFGKSGYGAVIQTPALHPGMFSSLMPWVSGADIKLRMCKFSRTAHIFVLARDQGSGTVNSPYSISYQMEAMDEENLKKGIEKILRILAAAG AEEIGTHHCKGKTINVKKASSEEFERFVKEESSRPLRDLSTPLSSAHQMGSCRMGIDPKTSVVNQMGETWGVEGLYLADTSVFPTALGVNPMVTVQAIAY CTAQSV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 781 Download |
| MVVELGSIDK ETLQLWGEEN HCYVNSLSSQ EMESLSALCD TFLPAVDVKQ AAAIDTDIAD 60 FFRASASAAG TPERLGGLMS ERLKHPKKWL VRLCLWLLST CIGSLILCGR YCFSSKFPYM 120 HSFTQLPQNK REAVLVSWSL SYFYHLRMLY KAMKLLIFLV FFTQVNEKNE NLSWKAIGYK 180 GPDPEFKTKS MQRKTLRNEG LNDDDDEGQN DDGHEEEAEL YGPLYKGLIN MQLPRNIVAD 240 SLRQVGFPVS VRNKRNAAPI SIASPSLVIK CDAVVVGSGS GGGVIAGVLA KAGYKVLVLE 300 KGSYCARSNL SLLEGKTMDQ MYLAGGMLAT DDMGVILLAG STVGGGSTIN WSASIKTPKH 360 VANEWCDEYE LKLFESDLYK EAMEVVCERI GVQSEVEDEG FNNAVLRRGC KELGYPVNNI 420 PRNSPPDHYC GWCCLGCKDG SKKGTSETWL VDLVNSGNSA ILPGCEAIEV LHKKRRDRNV 480 ATGVAFEFQY MGAKDICVVE SKVTIVACGA LSTPNLLKRS GLKNANIGKN LHLHPVTMAW 540 GYFPKTSSSG EWPEEKKTSY EGGIMTAMST TVGNFGKSGY GAVIQTPALH PGMFSSLMPW 600 VSGADIKLRM CKFSRTAHIF VLARDQGSGT VNSPYSISYQ MEAMDEENLK KGIEKILRIL 660 AAAGAEEIGT HHCKGKTINV KKASSEEFER FVKEESSRPL RDLSTPLSSA HQMGSCRMGI 720 DPKTSVVNQM GETWGVEGLY LADTSVFPTA LGVNPMVTVQ AIAYCTAQSV LDVLRRKKSN 780 * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-6 | 711 | 749 | 39 | + choline dehydrogenase; Validated | ||
| pfam05199 | GMC_oxred_C | 6.0e-25 | 637 | 764 | 128 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 1.0e-37 | 289 | 764 | 533 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 1.0e-71 | 318 | 536 | 222 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29206.1 | 0 | 2 | 774 | 10 | 644 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_193673.2 | 0 | 32 | 778 | 1 | 726 | alcohol oxidase-related [Arabidopsis thaliana] |
| RefSeq | XP_002269629.1 | 0 | 2 | 778 | 10 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328753.1 | 0 | 32 | 780 | 1 | 747 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002519938.1 | 0 | 74 | 779 | 7 | 710 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ljp_B | 0.000004 | 439 | 762 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3ljp_A | 0.000004 | 439 | 762 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant |
| PDB | 3nne_H | 0.000007 | 439 | 762 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.000007 | 439 | 762 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.000007 | 439 | 762 | 204 | 518 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
