| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011358m |
| Family | AA1 |
| Protein Properties | Length: 582 Molecular Weight: 64436.7 Isoelectric Point: 10.494 |
| Chromosome | Chromosome/Scaffold: 6 Start: 14372276 End: 14374972 |
| Description | laccase 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 37 | 569 | 0 |
| TRHYKFNIEMKNVRRLCQTKSIVTVNGQFPGPRIIAREGDRLLIKVVNHVKYNVTLHWHGVRQLRSGWADGPAYITQCPIQTGQSYVYNFTVTGQRGTLF WHAHISWLRATLYGPIVILPKRHASYPFPQPFKEVPMIFGEWWKADTEKIINQALQTGAAPNISDAFTINGLPGPLYNCSAKDTFKLKVKPGKTYLLRMI NAALNDELFFSIANHTLTVVETDAVYVKPIKTKVVLITPGQTTNVLLKAKHKSPNASFLIAARPYATGPASFDNTTTAGVLEYEQPNNANKNKKLPLLKP ALPKFNDTNFAMQFSKKIRSLATAKFPAKVPRKVDRRFFFTVGLGLSPCPQNQTCQGPNNTMLAASINNVSFAQPNIALLQAHFFNKSKGVYTTDFPANP PFKFNYTGTPPSNIMVSSGTRAVALPFNASVEVVMQDTSIIGAESHPLHLHGFNFFVVGQGFGNFDPSKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD NPGAWFMHCHLEVHTSWGLKMAWIVNDGKGPKQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MGRSHLLPSA ILKAMFLALF AMWILPEPAL AKHARVTRHY KFNIEMKNVR RLCQTKSIVT 60 VNGQFPGPRI IAREGDRLLI KVVNHVKYNV TLHWHGVRQL RSGWADGPAY ITQCPIQTGQ 120 SYVYNFTVTG QRGTLFWHAH ISWLRATLYG PIVILPKRHA SYPFPQPFKE VPMIFGEWWK 180 ADTEKIINQA LQTGAAPNIS DAFTINGLPG PLYNCSAKDT FKLKVKPGKT YLLRMINAAL 240 NDELFFSIAN HTLTVVETDA VYVKPIKTKV VLITPGQTTN VLLKAKHKSP NASFLIAARP 300 YATGPASFDN TTTAGVLEYE QPNNANKNKK LPLLKPALPK FNDTNFAMQF SKKIRSLATA 360 KFPAKVPRKV DRRFFFTVGL GLSPCPQNQT CQGPNNTMLA ASINNVSFAQ PNIALLQAHF 420 FNKSKGVYTT DFPANPPFKF NYTGTPPSNI MVSSGTRAVA LPFNASVEVV MQDTSIIGAE 480 SHPLHLHGFN FFVVGQGFGN FDPSKDPAKF NLVDPAERNT VGVPSGGWVA IRFLADNPGA 540 WFMHCHLEVH TSWGLKMAWI VNDGKGPKQK LPPPPSDLPK C* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07732 | Cu-oxidase_3 | 1.0e-54 | 43 | 157 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| PLN02191 | PLN02191 | 5.0e-64 | 17 | 560 | 577 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 3.0e-69 | 14 | 555 | 574 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-82 | 37 | 555 | 557 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 37 | 562 | 527 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI30528.1 | 0 | 7 | 581 | 1253 | 1829 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30528.1 | 0 | 22 | 175 | 1 | 154 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271006.1 | 0 | 7 | 581 | 1 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309069.1 | 0 | 9 | 581 | 3 | 579 | laccase 110c [Populus trichocarpa] |
| RefSeq | XP_002531562.1 | 0 | 4 | 581 | 5 | 585 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 38 | 558 | 4 | 520 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asq_A | 0 | 38 | 558 | 4 | 520 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1asp_B | 0 | 38 | 558 | 4 | 520 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
