| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011373m |
| Family | AA7 |
| Protein Properties | Length: 573 Molecular Weight: 62608 Isoelectric Point: 6.2412 |
| Chromosome | Chromosome/Scaffold: 6 Start: 19498176 End: 19507456 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 149 | 344 | 1.9e-28 |
| NIPDIIVFPRSEDEVSKIVKCCDKHKVPIIPYGGATSIEGHTLSPNGGVCIDMSLMKSVKALHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGAT IGGMCATRCSGSLAVRYGTMRDNVINLKVVLANGDVVKTASRARKSAAGYDLTRLIIGSEGTLGIITEVTLRLQKIPQHSVVATCNFPTIKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 573 Download |
| MAYYSFWLAR LRSSSKSILS SLRTSKFSTQ NTRTRTLITL SSDNSSRNGT PFQLFSASLL 60 PLALAASAGS LAMQSQTHPS LCDSSALDSR DVNIGGKGST EYVVKGSHKE IPQELVDELK 120 AICQDDMTMD YEERYIHGKP QNSFHKAVNI PDIIVFPRSE DEVSKIVKCC DKHKVPIIPY 180 GGATSIEGHT LSPNGGVCID MSLMKSVKAL HIEDMDVVVE PGIGWMELNE YLEPYGLFFP 240 LDPGPGATIG GMCATRCSGS LAVRYGTMRD NVINLKVVLA NGDVVKTASR ARKSAAGYDL 300 TRLIIGSEGT LGIITEVTLR LQKIPQHSVV ATCNFPTIKD AADVAIATML SGIQVSRVEL 360 LDEVQVRAVN IANGKNLPEL PTLMFEFIGT QAYSHEQTLI VQKIVSEHNG TDFIFAEDPE 420 AKKELWKMRK EALWACFAME PSFEAMISDV CVPLSCLAEL ISRSKKELDA SPLICTVIAH 480 AGDGNFHTVI LFDPSKEEDR QEAERLNRFM VHTALSMEGT CTGEHGIGTG KMKYLEKELG 540 TGALETMKRI KVALDPNNIM NPGKLIPPHI CF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 6.0e-49 | 150 | 571 | 428 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 4.0e-69 | 324 | 565 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 1.0e-94 | 154 | 564 | 419 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 2.0e-121 | 118 | 568 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 76 | 572 | 497 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 82 | 572 | 69 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 13 | 572 | 8 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 4 | 572 | 3 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 94 | 572 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 572 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 5.99756e-43 | 153 | 566 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 5.99756e-43 | 153 | 566 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 5.99756e-43 | 153 | 566 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 5.99756e-43 | 153 | 566 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 5.99756e-43 | 153 | 566 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY305587 | 368 | 205 | 572 | 0 |
| EX265038 | 323 | 165 | 486 | 0 |
| DY302195 | 327 | 1 | 327 | 0 |
| EX261606 | 322 | 222 | 539 | 0 |
| EX261606 | 52 | 520 | 569 | 0.15 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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