y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10011400m |
Family | AA1 |
Protein Properties | Length: 556 Molecular Weight: 60485.7 Isoelectric Point: 9.8237 |
Chromosome | Chromosome/Scaffold: 6 Start: 15761841 End: 15764472 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 21 | 541 | 0 |
CRVRHYKFNVVMKNSTKLCSSKPIVTVNGKFPGPTLYAREHDTVLVKVVNHVKYNVTIHWHGVRQLRTGWADGPAYITQCPIQSGHSYVYNFTITGQRGT LLWHAHILWLRATVHGAIVILPKRGVPYPFPKPHKEVVVVLAEWWKSDTEAVINQALRSGLAPNVSDSHTINGQPGPISSCSSQGGFTLPVDSGKTYMLR IINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTIVIAPGQTTNVLLSADKTSGKYLVAASPFMDAPIAVDNATATATLHYSGTLASSATTLTSTPPK NGTAIANKFIDSLRSLNSKKYPAKVPQTVDHNLLFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTIALLQAHFFNISGVFTTDFPGNPPHTYNFTGT PKNLQTSNGTKAYRLAYNSTVQLILQDTGIIAPENHPVHLHGFNFFAVGKGLGNFNPKKDPKKFNLVDPVERNTIGVPSGGWVAIRFSADNPGVWFMHCH LEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 556 Download |
MDSWVRLLLL VACLFPALVE CRVRHYKFNV VMKNSTKLCS SKPIVTVNGK FPGPTLYARE 60 HDTVLVKVVN HVKYNVTIHW HGVRQLRTGW ADGPAYITQC PIQSGHSYVY NFTITGQRGT 120 LLWHAHILWL RATVHGAIVI LPKRGVPYPF PKPHKEVVVV LAEWWKSDTE AVINQALRSG 180 LAPNVSDSHT INGQPGPISS CSSQGGFTLP VDSGKTYMLR IINAALNEEL FFKIAGHKLT 240 VVEVDATYVK PFKTDTIVIA PGQTTNVLLS ADKTSGKYLV AASPFMDAPI AVDNATATAT 300 LHYSGTLASS ATTLTSTPPK NGTAIANKFI DSLRSLNSKK YPAKVPQTVD HNLLFTVGLG 360 VNPCPSCKAG NGSRVVASIN NVTFVMPTIA LLQAHFFNIS GVFTTDFPGN PPHTYNFTGT 420 PKNLQTSNGT KAYRLAYNST VQLILQDTGI IAPENHPVHL HGFNFFAVGK GLGNFNPKKD 480 PKKFNLVDPV ERNTIGVPSG GWVAIRFSAD NPGVWFMHCH LEVHTTWGLK MAFLVDNGKG 540 PNESLLPPPS DLPKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 2.0e-63 | 23 | 545 | 562 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-79 | 20 | 533 | 544 | + oxidoreductase | ||
TIGR03388 | ascorbase | 8.0e-87 | 23 | 533 | 543 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 21 | 555 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC49536.1 | 0 | 1 | 555 | 1 | 557 | diphenol oxidase [Nicotiana tabacum] |
RefSeq | XP_002308208.1 | 0 | 4 | 555 | 6 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 7 | 555 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 3 | 555 | 4 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 3 | 555 | 4 | 557 | laccase 1b [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 533 | 2 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1asq_A | 0 | 22 | 533 | 2 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 1asp_B | 0 | 22 | 533 | 2 | 521 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |