| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011407m |
| Family | GT47 |
| Protein Properties | Length: 553 Molecular Weight: 62002.2 Isoelectric Point: 9.6937 |
| Chromosome | Chromosome/Scaffold: 6 Start: 21306580 End: 21310209 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 215 | 496 | 0 |
| EQKFKVFVYEEGEPPVFHDGPCKSIYSMEGNFIYTMEVNKQFRTKEADKAHVFFLPFSVVKLVRFVYVRDSHDFGPIRRTVIDYVNLIAGKYPYWNRSLG ADHFMLACHDWGPETSFSVPYLGKNSIRVLCNANTSEKFSPVKDVSFPEINLQTGGLTGLIGGPSPSRRSILAFFAGGVHGPIRPVLLEHWENKDEDIRV HKYLPKGVSYYEMMRKSKYCLCPSGYEVASPRVVEAIYTGCVPVLISEHYVPPFSDVLNWKSFSVALSTRDIPNLKSILTSI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 553 Download |
| MGSSSFSSSF KVLLFMIPLA VLFGFVSVMG PRASTSPVIL SNHPWLWSSF SSSSSSSNNN 60 QLKIDVVASK AKAVDLHSTV VMAGVEDKKE GLLSDPLNLN RSSSTPTAVQ PAVRVQDQSN 120 STMEIDGLNI SMSTTNKTLG VAVAAATNET HAVPMKAERK RAVTKLEKLE AGLQRARVAI 180 KEASIGNQTQ DPDFVPLGPM YWDSKAFHRS YLEMEQKFKV FVYEEGEPPV FHDGPCKSIY 240 SMEGNFIYTM EVNKQFRTKE ADKAHVFFLP FSVVKLVRFV YVRDSHDFGP IRRTVIDYVN 300 LIAGKYPYWN RSLGADHFML ACHDWGPETS FSVPYLGKNS IRVLCNANTS EKFSPVKDVS 360 FPEINLQTGG LTGLIGGPSP SRRSILAFFA GGVHGPIRPV LLEHWENKDE DIRVHKYLPK 420 GVSYYEMMRK SKYCLCPSGY EVASPRVVEA IYTGCVPVLI SEHYVPPFSD VLNWKSFSVA 480 LSTRDIPNLK SILTSISPRQ YIRMHRRVVQ VRRHFEFNSP PKRFDVFHMI LHSIWLRRLN 540 VRIQNDQSAV TS* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam03016 | Exostosin | 3.0e-64 | 214 | 496 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB08605.1 | 0 | 144 | 544 | 6 | 406 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001031828.1 | 0 | 102 | 544 | 89 | 516 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002284018.1 | 0 | 214 | 545 | 1 | 332 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326234.1 | 0 | 214 | 541 | 1 | 328 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528630.1 | 0 | 34 | 552 | 51 | 574 | catalytic, putative [Ricinus communis] |
