| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10011408m |
| Family | GT31 |
| Protein Properties | Length: 552 Molecular Weight: 62450.4 Isoelectric Point: 7.2066 |
| Chromosome | Chromosome/Scaffold: 6 Start: 24964964 End: 24968843 |
| Description | galactosyltransferase1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 310 | 497 | 0 |
| KRRMAVRRAWMQYPAVKAGAVAVRFFVGLHKNQIVNEELWTELQTYRDIQLMPFVDYYSLITWKTVAICIFGTEVVSAKYVMKTDDDAFVRVDEVLASLN RANVTQGLLYGLINADARPHRSPDSKWYISPEEWPESSYPPWAHGPGYVVSYDIAKAVAKRHKGHLKGRLIQMFKLEDVAMGIWIAQL | |||
| Full Sequence |
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| Protein Sequence Length: 552 Download |
| MTWNRMKHLI KYSQGLPNAV EAFREAGVAW DNLMDSFGKD QHGDLNGSSV HKVKEKQCPH 60 FLSNINATGF GDSGYRLRIP CGLIQGSSIT IIGIPNGLLG DFRIDLTGEP TPGEADPPLV 120 LHYNVRLHGD KVTENPVIVQ NTWTATQDWG EEERCPSPVP GKNKKVDELK QCNEIVGNNE 180 GRKLTGNESS YISLRSSMER NKTRASQYFP FKQGYLSVMT LRLGEEGIQM TVDGKHITSF 240 AFRESLEPWL VSEVRISGDL ELISVLASGL PTSEVLDEIV DLEDLRSVPL PLHHRLDLFI 300 GVFSTANNFK RRMAVRRAWM QYPAVKAGAV AVRFFVGLHK NQIVNEELWT ELQTYRDIQL 360 MPFVDYYSLI TWKTVAICIF GTEVVSAKYV MKTDDDAFVR VDEVLASLNR ANVTQGLLYG 420 LINADARPHR SPDSKWYISP EEWPESSYPP WAHGPGYVVS YDIAKAVAKR HKGHLKGRLI 480 QMFKLEDVAM GIWIAQLKKL GMQVSYINEP RVYNEGCRDQ FVVAHYQSPR EMLCLWQKLK 540 EERLAKCCDD R* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 5.0e-20 | 80 | 265 | 186 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 3.0e-22 | 74 | 265 | 192 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 1.0e-22 | 310 | 510 | 207 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam00337 | Gal-bind_lectin | 2.0e-23 | 75 | 265 | 191 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 0 | 2 | 551 | 551 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI22225.1 | 0 | 2 | 551 | 90 | 635 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002269607.1 | 0 | 2 | 550 | 91 | 635 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283624.1 | 0 | 2 | 551 | 90 | 639 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316134.1 | 0 | 2 | 551 | 90 | 632 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522444.1 | 0 | 2 | 550 | 92 | 631 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES803599 | 358 | 56 | 413 | 0 |
| EL350926 | 289 | 93 | 381 | 0 |
| FN762099 | 334 | 140 | 472 | 0 |
| GT034010 | 304 | 227 | 530 | 0 |
| EB682269 | 255 | 147 | 401 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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