Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10011454m |
Family | GT1 |
Protein Properties | Length: 535 Molecular Weight: 59265.4 Isoelectric Point: 6.9299 |
Chromosome | Chromosome/Scaffold: 6 Start: 6816285 End: 6823212 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 96 | 502 | 0 |
VGTRGDVQPFVAIGKRLQEDGHRVRLATHANFKDFVLGAGLEFFPLGGDPKILAGYMVKNKGFLPSGPSEIPIQRNQLKEIIYSLLPACKDPDPDTMVPF KPDAIIANPPAYGHTHVAESLKVPLHIIFTMPWTPTSEFPHPLSRVKQPVAYRLSYQIVDALIWLGIRDMINDFRKKRLNLRRVTYLSGSYSSPLDVPYA YIWSPHLVPKPKDWGPKIDVVGFCFLDLASTYEPPDSLVKWLEDGEKPIYIGFGSLPVEEPEKMTEIIVKALEITGHRGIINKGWGGLGNLAESKDFLYL LDNCPHDWLFSRCLAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGLGPAPIPVDEFSLDKLVDAIRFMLHPKVKERAVELAKAMENEDGV TGAVKAF |
Full Sequence |
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Protein Sequence Length: 535 Download |
MSVVYTISLG TIRSCYNDSQ ATNTTMLIVV QLKWLNRLAT VKDDGTVQFE VPADIKPQNL 60 DFGTGVVYTD DSTDQEPIEA ADVHGIPPLH IVMLIVGTRG DVQPFVAIGK RLQEDGHRVR 120 LATHANFKDF VLGAGLEFFP LGGDPKILAG YMVKNKGFLP SGPSEIPIQR NQLKEIIYSL 180 LPACKDPDPD TMVPFKPDAI IANPPAYGHT HVAESLKVPL HIIFTMPWTP TSEFPHPLSR 240 VKQPVAYRLS YQIVDALIWL GIRDMINDFR KKRLNLRRVT YLSGSYSSPL DVPYAYIWSP 300 HLVPKPKDWG PKIDVVGFCF LDLASTYEPP DSLVKWLEDG EKPIYIGFGS LPVEEPEKMT 360 EIIVKALEIT GHRGIINKGW GGLGNLAESK DFLYLLDNCP HDWLFSRCLA VVHHGGAGTT 420 AAGLKAACPT TIVPFFGDQP FWGERVHARG LGPAPIPVDE FSLDKLVDAI RFMLHPKVKE 480 RAVELAKAME NEDGVTGAVK AFYKHFPGKK SESEPELPHS HRGLLSIRRC FGHT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1819 | COG1819 | 5.0e-33 | 90 | 500 | 420 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
pfam03033 | Glyco_transf_28 | 5.0e-33 | 91 | 235 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
cd03784 | GT1_Gtf_like | 8.0e-121 | 90 | 505 | 420 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030259 | lipid glycosylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC22617.1 | 0 | 19 | 532 | 92 | 600 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
EMBL | CBI37267.1 | 0 | 15 | 532 | 98 | 613 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265023.1 | 0 | 15 | 532 | 145 | 660 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002512608.1 | 0 | 31 | 532 | 94 | 594 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
RefSeq | XP_002521125.1 | 0 | 19 | 532 | 112 | 624 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3h4t_A | 3e-30 | 89 | 511 | 1 | 386 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3h4i_A | 3e-30 | 89 | 511 | 1 | 386 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
PDB | 1rrv_B | 1e-20 | 89 | 494 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1rrv_A | 1e-20 | 89 | 494 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 1iir_A | 9e-20 | 333 | 498 | 230 | 391 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT046352 | 335 | 98 | 432 | 0 |
GO883166 | 335 | 50 | 384 | 0 |
DV466557 | 287 | 208 | 494 | 0 |
EH765453 | 283 | 97 | 379 | 0 |
GT046352 | 32 | 425 | 456 | 0.0003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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