| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10012239m |
| Family | CE8 |
| Protein Properties | Length: 317 Molecular Weight: 35649.5 Isoelectric Point: 7.5854 |
| Chromosome | Chromosome/Scaffold: 6 Start: 25121919 End: 25125183 |
| Description | pectin methylesterase 31 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 6 | 296 | 0 |
| VTVAQDGTGHYRTVQEAIDRVPLCNTCRTLIRISPGVYRQPVYVPKTKNLITLAGRCPENTVLTWNNTATKIEHHQAARVIGTGTFGCGSVIVEGEDFVA ENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQGFITAQSRKSSQETTGYVFLR CVITGNGGTGYMYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLDEEAEQFLMHNFID | |||
| Full Sequence |
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| Protein Sequence Length: 317 Download |
| MASCVVTVAQ DGTGHYRTVQ EAIDRVPLCN TCRTLIRISP GVYRQPVYVP KTKNLITLAG 60 RCPENTVLTW NNTATKIEHH QAARVIGTGT FGCGSVIVEG EDFVAENITF ENSAPEGSGQ 120 AVAIRVTADR CAFYNCRFLG WQDTLYLHYG KQYLKDCYIE GSVDFIFGNS TALIEHCHIH 180 CKSQGFITAQ SRKSSQETTG YVFLRCVITG NGGTGYMYLG RPWGPFGRVV FAFTYMDQCI 240 RHVGWHNWGK VENERSACFY EYRCFGPGSC PAKRETWARE LLDEEAEQFL MHNFIDPDPQ 300 RPWLAQRMAV RIPYSA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam01095 | Pectinesterase | 3.0e-88 | 6 | 298 | 311 | + Pectinesterase. |
| PLN02665 | PLN02665 | 2.0e-90 | 5 | 296 | 300 | + pectinesterase family protein |
| PLN02432 | PLN02432 | 1.0e-95 | 1 | 296 | 298 | + putative pectinesterase |
| PLN02682 | PLN02682 | 1.0e-106 | 12 | 296 | 292 | + pectinesterase family protein |
| PLN02773 | PLN02773 | 0 | 1 | 316 | 316 | + pectinesterase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08265.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase [Medicago truncatula] |
| RefSeq | NP_566842.1 | 0 | 5 | 316 | 6 | 317 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002283941.1 | 0 | 1 | 316 | 1 | 316 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305315.1 | 0 | 1 | 316 | 1 | 316 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530008.1 | 0 | 1 | 316 | 1 | 316 | Pectinesterase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 6 | 295 | 9 | 302 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1.99993e-41 | 8 | 277 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 6e-25 | 3 | 295 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 6e-25 | 3 | 295 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 7e-25 | 3 | 295 | 5 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY292729 | 314 | 1 | 313 | 0 |
| DY292725 | 301 | 1 | 301 | 0 |
| FC883979 | 283 | 1 | 283 | 0 |
| DY263417 | 312 | 1 | 311 | 0 |
| FC883956 | 278 | 1 | 278 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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