CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10013575m
FamilyAA7
Protein PropertiesLength: 149 Molecular Weight: 16210.6 Isoelectric Point: 9.4468
ChromosomeChromosome/Scaffold: 6 Start: 23835313 End: 23835759
DescriptionFAD-binding Berberine family protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA7281429.8e-30
  KPKSIFVLLHKSHVQAAVICTRKLGIHMRVRRRGHDYEGPFYASEIKTHFIVVDISDLRSINIDIKDSSAWIQEGSTTGEVYYKIAEKSNVHGFSAGYCT
  SIGIGGHITRGAYGP
Full Sequence
Protein Sequence     Length: 149     Download
MSSFSSILNS TAQNIFQIFG AFTASLPKPK SIFVLLHKSH VQAAVICTRK LGIHMRVRRR    60
GHDYEGPFYA SEIKTHFIVV DISDLRSINI DIKDSSAWIQ EGSTTGEVYY KIAEKSNVHG    120
FSAGYCTSIG IGGHITRGAY GPIGCLSL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG0277GlcD0.00241142107+
pfam01565FAD_binding_49.0e-1029142115+
Gene Ontology
GO TermDescription
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002299030.10214132167predicted protein [Populus trichocarpa]
RefSeqXP_002299036.10214355192predicted protein [Populus trichocarpa]
RefSeqXP_002317089.10214155190predicted protein [Populus trichocarpa]
RefSeqXP_002326177.10214328165predicted protein [Populus trichocarpa]
RefSeqXP_002330563.10214328166predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vte_A7e-28412933152A Chain A, Crystal Structure Of Tetrahydrocannabinolic Acid Synthase From Cannabis Sativa
PDB4dns_B9e-27312933155A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens
PDB4dns_A9e-27312933155A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens
PDB3fw9_A3e-21212923144A Chain A, Structure Of Berberine Bridge Enzyme In Complex With (S)-Scoulerine
PDB4ec3_A4e-21212929150A Chain A, Structure Of Berberine Bridge Enzyme, H174a Variant In Complex With (S)-Reticuline
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FR61678514021410
CF82956714221430
CU51002714221430
CF82956914221430
FS27157214021410
Orthologous Group
SpeciesID
Brassica rapaBra023123.69.187Bra023123.69.187
Citrus clementinaCiclev10024072mCiclev10015575m
Citrus sinensisorange1.1g027960morange1.1g041546morange1.1g048047m
Eucalyptus grandisEucgr.F04104.1
Fragaria vescamrna20162.1-v1.0-hybrid
Glycine maxGlyma15g16451.1
Malus domesticaMDP0000281703
Manihot esculentacassava4.1_028283m
Medicago truncatulaAC233560_1010.1.101.204AC233560_1010.1.101.204
Picea abiesMA_10427412g0010.242.461MA_228933g0010MA_10430302g0010MA_10427412g0010.242.461MA_613919g0010.76.206
MA_10427412g0010.57.194MA_10427412g0010.57.194MA_613919g0010.76.206
Populus trichocarpaPotri.001G462500.1
Prunus persicappa019537mppa017770mppa021171m
Vitis viniferaGSVIVT01021739001GSVIVT01021745001GSVIVT01037107001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny