| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10014015m |
| Family | GT48 |
| Protein Properties | Length: 1947 Molecular Weight: 225328 Isoelectric Point: 9.5186 |
| Chromosome | Chromosome/Scaffold: 2 Start: 5051727 End: 5070220 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1049 | 1801 | 0 |
| VPSNLEARRRISFFSNSLFMDMPEAPKVRNMLSFSVLTPYYTEEVLFSLRDLEIHNEDGVSILFYLQKIFPDEWTNFLERVKCNNEEELKGSDELEEELR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMAKHEDLMEGYKAIELNSDDKGERSLLTQCQAVADMKFTYVVSCQLYGIHKRSGDARAQDILKLMTKYP SLRVAYIDEVEEPSKDRSKKINQKVYYSALVKAVPKSKDSSIPVQNLDQVIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMR NLLQEFLKKHDGVRYPSILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTL REGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDLYRLGHRFDFFRMLSCYFTTIGFYFSTLITVLTVYVFLYGRLYLVLSGLEEGLITQP AIRDNKPLQVALASQSFVQLGFMMSLPMLMEIGLERGFRTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRSTGRGFVVFHAKFADNYRLY SRSHFVKGIEMMILLIVYQIFGQSYRGAVAYILITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWISNRGGIGVPPEKSWESWWEEEQEHLQH SGKRGIIAEIVLALRFFIYQYGLVYHLKMTKHTKSFLVYGVSWLVIFLVLFVM | |||
| Full Sequence |
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| Protein Sequence Length: 1947 Download |
| MSSRGGGPDQ PPPQRRIMRT QTAGNLGESM FDSEVVPSSL SEIAPILRVA NEVESSNPRV 60 AYLCRFYAFE KAHRLDPTSS GRGVRQFKTA LLQRLERENA PTYMERGKKS DAREMQSFYQ 120 HYYKKYIQAL QNAADKADRA QLTKAYQTAN VLFEVLKAVN LTESMEVDRE ILEAQDKVAE 180 KTQIYVPYNI LPLDPDSANQ AIMRYPEIQA AVLALRYTRG LPWPNEHNKK KDEDILDWLQ 240 EMFGFQKDNV ANQREHLILL LANVHIRQFP KPDQQPKLDD RALTDVMKKL FKNYKRWCKY 300 LDRKSSLWLP TIQQDVQQRK LLYMGLYLLI WGEAANLRFM PECLCYIYHH MAFELYGMLA 360 GNVSPMTGEN VKPAYGGEDE AFLRKVVTPI YEVIAREAER SKRGKSKHSQ WRNYDDLNEY 420 FWSVDCFRLG WPMRADADFF GLPIEQLRFE KSEDNKPANR DRWLGKVNFV EIRSFWHIFR 480 SFDRMWSFFI LCLQVMIIVA WNGSGNPSSI FEVDVFKKVL SVFITAAILK LGQAILDVIL 540 NWKARRSMSF HVKLRYILKV VSAAAWVIVL PVTYAYTWEN PPGFAQTIKS WFGSTANSPS 600 LFILAVVIYL SPNMLSAVLF LFPFIRRVLE RSNYRIVMLI MWWSQPRLYV GRGMHESAFS 660 LFKYTLFWVL LIITKLAFSY YIEIKPLVGP TKDIMRVRIT DFQWHEFFPR AKNNIGVVIA 720 LWAPIILVYF MDAQIWYAIF STIFGGIYGA FRRLGEIRTL GMLRSRFQSL PGAFNGCLIP 780 EERSEPKKKG LRATLSRNFA EIPSNKEKEA ARFAQLWNKV ITSFREEDLI SDREMNLLLV 840 PYWADRDLGL IQWPPFLLAS KIPIALDMAK DSNGKDRELK KRIEADDYMS CAVKECYASF 900 RNIIKFLVQG NEKRVIDDIF SEVDRHIEAG NLISEYKMSS LPSLYDHFVK LIKYLLDNKQ 960 EDRDQVVILF QDMLEVVTRD IMMEDHISSL VESVHGGSGH EGLVPLEQRY QLFASSGAIR 1020 FPAPETEAWK EKIKRLYLLL TTKESAMDVP SNLEARRRIS FFSNSLFMDM PEAPKVRNML 1080 SFSVLTPYYT EEVLFSLRDL EIHNEDGVSI LFYLQKIFPD EWTNFLERVK CNNEEELKGS 1140 DELEEELRLW ASYRGQTLTR TVRGMMYYRK ALELQAFLDM AKHEDLMEGY KAIELNSDDK 1200 GERSLLTQCQ AVADMKFTYV VSCQLYGIHK RSGDARAQDI LKLMTKYPSL RVAYIDEVEE 1260 PSKDRSKKIN QKVYYSALVK AVPKSKDSSI PVQNLDQVIY RIKLPGPAIL GEGKPENQNH 1320 AIIFTRGEGL QTIDMNQDNY MEEALKMRNL LQEFLKKHDG VRYPSILGLR EHIFTGSVSS 1380 LAWFMSNQET SFVTIGQRLL ANPLKVRFHY GHPDVFDRLF HLTRGGVSKA SKIINLSEDI 1440 FAGFNSTLRE GNVTHHEYIQ VGKGRDVGLN QISMFEAKIA NGNGEQTLSR DLYRLGHRFD 1500 FFRMLSCYFT TIGFYFSTLI TVLTVYVFLY GRLYLVLSGL EEGLITQPAI RDNKPLQVAL 1560 ASQSFVQLGF MMSLPMLMEI GLERGFRTAL SEFILMQLQL APVFFTFSLG TKTHYYGRTL 1620 LHGGAKYRST GRGFVVFHAK FADNYRLYSR SHFVKGIEMM ILLIVYQIFG QSYRGAVAYI 1680 LITISMWFMV GTWLFAPFLF NPSGFEWQKI VDDWTDWNKW ISNRGGIGVP PEKSWESWWE 1740 EEQEHLQHSG KRGIIAEIVL ALRFFIYQYG LVYHLKMTKH TKSFLVYGVS WLVIFLVLFV 1800 MKTVSVGRRK FSANFQLVFR LIKGLIFLTF ISILVTLIAL PHMTVRDIIV CILAFMPTGW 1860 GMLLIAQALK PVIHRAGFWG SVRTLARGYE IVMGLLLFTP VAFLAWFPFV SEFQTRMLFN 1920 QAFSRGLQIS RILGGQRKDR SSRNKE* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03772 | Competence | 0.006 | 474 | 676 | 211 | + Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site. | ||
| pfam04652 | DUF605 | 5.0e-10 | 43 | 157 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 6.0e-59 | 318 | 434 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1049 | 1800 | 829 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 1 | 1946 | 1 | 1948 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LXT9 | 0 | 1 | 1946 | 1 | 1964 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
| RefSeq | XP_002283298.1 | 0 | 1 | 1946 | 1 | 1947 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 1 | 1946 | 3 | 1940 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 2 | 1946 | 3 | 1955 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
