CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10014250m
FamilyCBM57
Protein PropertiesLength: 855 Molecular Weight: 94957.6 Isoelectric Point: 6.0185
ChromosomeChromosome/Scaffold: 2 Start: 31344537 End: 31347747
Descriptionhercules receptor kinase 2
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM572243783.6e-22
  YRLNVGGPEIKPSRDPDLWRMWEADSSYMITANAGSEIRNSSNITYASMNDSSVAPLLVYETARTMSNTEVLEKRFNMSWKFEVDPNFDYFVRLHFCELV
  YEKANQRIFRIYINNRTAENNFDIFMQAGGKNRGYHRDYFDAVSSKIETLWIQLG
Full Sequence
Protein Sequence     Length: 855     Download
MLLMERVLLF LVIMLVVARI GEARSKSFLI NCGTNSSVNV DGRKWVGDLA SNNNVTLSSS    60
GIAATTDSLS GDSIYEPLYR SARVFSDGLN YTFEIIPGNY IVRLHFCPFP LEDYNVNKSS    120
FGVAANGLKL LSEFSAPGEI SHKNLYLQSS GGNSSSISLV KEYFLGIDLD KLMIEFIPSK    180
GSFGFINAIE IVPVVDKLFA DTINKVGGND VNFNLSGRGV ETMYRLNVGG PEIKPSRDPD    240
LWRMWEADSS YMITANAGSE IRNSSNITYA SMNDSSVAPL LVYETARTMS NTEVLEKRFN    300
MSWKFEVDPN FDYFVRLHFC ELVYEKANQR IFRIYINNRT AENNFDIFMQ AGGKNRGYHR    360
DYFDAVSSKI ETLWIQLGPD TAVGAAGTDA LLNGLEIFKL SQNGNLASVE RFDSSGNPVG    420
RSNKWILLVG IGAGIASVVV LAVLFALIFC YCKNRREKSS DPKNNSPGWR PLFFHRGTLN    480
STANAKGSGT RYLNGSVAST RAGKQFTLAE IRAATNNFDE SLMIGVGGFG KVFKGEIEDC    540
TLVAIKRANP QSEQGLAEFE TEIEMLSKLR HRHLVSLIGF CDEQNEMILV YEYMANGTLR    600
SHLFGCDLPP LTWKQRLDAC IGAARGLHYL HTGAERGIIH RDVKTTNILL DENFVAKMSD    660
FGLSKTGPSM EHTHVSTAVK GSFGYLDPEY FWRQQLTEKS DVYSFGVVLF EVVCARAVIN    720
PTLPKDQINL AEWAMKWQKQ RSLKSIIDPH LKGNYSPESL EKFGEIAEKC LDDEGKNRPT    780
MGEVLWHLEY VLQLHEAWMS TNDRQNSFSS SQALGEFAER EAEDRQDAPT PDAENSSGLK    840
MTGEFGSATM GISK* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam07714Pkinase_Tyr7.0e-44539714177+
smart00219TyrKc3.0e-44543788253+
smart00221STYKc8.0e-45541788255+
cd00192PTKc4.0e-46541789259+
pfam12819Malectin_like8.0e-6030400383+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI31024.1048531843unnamed protein product [Vitis vinifera]
RefSeqXP_002264211.10485346888PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299052.10883612833predicted protein [Populus trichocarpa]
RefSeqXP_002330599.10882912832predicted protein [Populus trichocarpa]
RefSeqXP_002523186.10883412834kinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2qkw_B050879731319A Chain A, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto
PDB3hgk_D050879731319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_C050879731319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_B050879731319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_A050879731319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
Transmembrane Domains
StartEnd
426448
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8051853424487840
GH2709232545838360
ES7930812525748250
EX3576022465397840
JG9619282705418100
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_026_00352.1
Brassica rapaBra032404
Citrus sinensisorange1.1g047215m
Eucalyptus grandisEucgr.K01945.1
Fragaria vescamrna28878.1-v1.0-hybrid
Malus domesticaMDP0000843097
Manihot esculentacassava4.1_030005m
Panicum virgatumPavirv00014838m
Populus trichocarpaPotri.011G164700.1Potri.001G467000.1
Setaria italicaSi028931m
Vitis viniferaGSVIVT01021662001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny